RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SNTG2Q9NY99 539 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 AJAP1Q9UKB5 411 aaPredicted RBP16.3■□□□□ 0.2
NPHP3-201ENST00000337331 NRXN3Q9Y4C0 1643 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 AGRPO00253 132 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 ACAT1P24752 427 aaKnown RBP16.3■□□□□ 0.2
NPHP3-201ENST00000337331 POU6F1Q14863 301 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 CYP2A13Q16696 494 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 GET4Q7L5D6 327 aaPredicted RBP16.3■□□□□ 0.2
NPHP3-201ENST00000337331 SLC9A9Q8IVB4 645 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 PARP8Q8N3A8 854 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 TMEM161BQ8NDZ6 487 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 DLG3Q92796 817 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 FAM84AQ96KN4 292 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 CENPOQ9BU64 300 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 PNPOQ9NVS9 261 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 USP12O75317 370 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 TCEA3O75764 348 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 CCNKO75909 580 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 FGRP09769 529 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 IRF1P10914 325 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 ITGB5P18084 799 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 FUT11Q495W5 492 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 SYTL1Q8IYJ3 562 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 C7orf43Q8WVR3 580 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 HTR3CQ8WXA8 447 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 EDEM1Q92611 657 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 ASB7Q9H672 318 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 GIT1Q9Y2X7 761 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 TIMM13Q9Y5L4 95 aaPredicted RBP16.3■□□□□ 0.2
NPHP3-201ENST00000337331 ST14Q9Y5Y6 855 aa16.3■□□□□ 0.2
NPHP3-201ENST00000337331 CENPXA8MT69 81 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 E5RJQ4 531 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 DPYSL4O14531 572 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 TBC1D4O60343 1298 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 MICAL2O94851 1124 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 SERPINE1P05121 402 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 MGAT1P26572 445 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 MAMLD1Q13495 774 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 DPYSL3Q14195 570 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 VSIG10LQ86VR7 867 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 ALLCQ8N6M5 410 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 FAM156AQ8NDB6 213 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 RCN3Q96D15 328 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 CCDC126Q96EE4 140 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 MROH8Q9H579 483 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 DDX43Q9NXZ2 648 aaKnown RBP16.29■□□□□ 0.2
NPHP3-201ENST00000337331 IGSF9Q9P2J2 1179 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 MYH15Q9Y2K3 1946 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 HNRNPCL2B2RXH8 293 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 DDX5P17844 614 aaKnown RBP16.29■□□□□ 0.2
NPHP3-201ENST00000337331 PCSK6P29122 969 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 ST13P50502 369 aaKnown RBP16.29■□□□□ 0.2
NPHP3-201ENST00000337331 GTF3C2Q8WUA4 911 aaPredicted RBP16.29■□□□□ 0.2
NPHP3-201ENST00000337331 HERC2P3Q9BVR0 1158 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 COQ10BQ9H8M1 238 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 SETD4Q9NVD3 440 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 PLK2Q9NYY3 685 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 WDR27A2RRH5 827 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 ODC1P11926 461 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 YWHAZP63104 245 aaKnown RBP16.29■□□□□ 0.2
NPHP3-201ENST00000337331 AGKQ53H12 422 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 TMEM26Q6ZUK4 368 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 EFL1Q7Z2Z2 1120 aaKnown RBP16.29■□□□□ 0.2
NPHP3-201ENST00000337331 TDRD5Q8NAT2 981 aaKnown RBP16.29■□□□□ 0.2
NPHP3-201ENST00000337331 STARD8Q92502 1023 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 FAM162AQ96A26 154 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 MARK4Q96L34 752 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 FICDQ9BVA6 458 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 TLE6Q9H808 572 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 RPRD1BQ9NQG5 326 aaKnown RBP16.29■□□□□ 0.2
NPHP3-201ENST00000337331 RBM22Q9NW64 420 aaKnown RBP eCLIP16.29■□□□□ 0.2
NPHP3-201ENST00000337331 FAM32AQ9Y421 112 aaKnown RBP16.29■□□□□ 0.2
NPHP3-201ENST00000337331 TRIM13O60858 407 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 CYBBP04839 570 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 SLC2A3P11169 496 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 KDELR1P24390 212 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 PSMA4P25789 261 aaKnown RBP16.29■□□□□ 0.2
NPHP3-201ENST00000337331 HARS2P49590 506 aaKnown RBP16.29■□□□□ 0.2
NPHP3-201ENST00000337331 TUBA1BP68363 451 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 PHC1P78364 1004 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 GSTM4Q03013 218 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 LLGL2Q6P1M3 1020 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 TUBA1AQ71U36 451 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 GATAD2AQ86YP4 633 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 OSCP1Q8WVF1 389 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 SHISA4Q96DD7 197 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 C17orf80Q9BSJ5 609 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 VTA1Q9NP79 307 aa16.29■□□□□ 0.2
NPHP3-201ENST00000337331 LSM7Q9UK45 103 aaKnown RBP16.29■□□□□ 0.2
NPHP3-201ENST00000337331 A0A096LPK6 155 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 CLDN25C9JDP6 229 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 FAM155BO75949 473 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 ZNF286BP0CG31 522 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 ADIGQ0VDE8 80 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 ADGRE1Q14246 886 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 PLCL1Q15111 1095 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 TLK2Q86UE8 772 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 CDH24Q86UP0 819 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 SLC16A10Q8TF71 515 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 FAR2Q96K12 515 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms