RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 MILR1Q7Z6M3 343 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 THEM5Q8N1Q8 247 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 PARP8Q8N3A8 854 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 ANKLE1Q8NAG6 615 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 PPHLN1Q8NEY8 458 aaKnown RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 OR6K2Q8NGY2 324 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 INPP5DQ92835 1189 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 WDR83Q9BRX9 315 aaKnown RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 APOL5Q9BWW9 433 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 GRIP2Q9C0E4 1043 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 CCDC90BQ9GZT6 254 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 SLC2A6Q9UGQ3 507 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 FARP1Q9Y4F1 1045 aaPredicted RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 PCDHA11Q9Y5I1 949 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 NUMBLQ9Y6R0 609 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 XIRP2A4UGR9 3374 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 NR5A2O00482 541 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 GNGT2O14610 69 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 GUCA1CO95843 209 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 DLDP09622 509 aaKnown RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 TPP2P29144 1249 aaPredicted RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 NOS2P35228 1153 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 FDFT1P37268 417 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 HADHAP40939 763 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 CD86P42081 329 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 CYLC2Q14093 348 aaPredicted RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 PTK2BQ14289 1009 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 OVOS1Q6IE37 1185 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 NAPEPLDQ6IQ20 393 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 NT5DC4Q86YG4 428 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 BHLHE22Q8NFJ8 381 aaPredicted RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 DENND1AQ8TEH3 1009 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 CYGBQ8WWM9 190 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 DCUN1D5Q9BTE7 237 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 MRPL1Q9BYD6 325 aaKnown RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 PCDHAC1Q9H158 963 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 POMKQ9H5K3 350 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 GBA2Q9HCG7 927 aaPredicted RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 BATF3Q9NR55 127 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 KIAA1257Q9ULG3 409 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 ANGPTL3Q9Y5C1 460 aa8.37□□□□□ -1.07
HPS4-201ENST00000336873 COL5A3P25940 1745 aaPredicted RBP8.37□□□□□ -1.07
HPS4-201ENST00000336873 MKI67P46013 3256 aaKnown RBP8.36□□□□□ -1.07
HPS4-201ENST00000336873 PABPN1LA6NDY0 278 aaKnown RBP8.36□□□□□ -1.07
HPS4-201ENST00000336873 SUPT3HB4E1H0 165 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 E5RI56 91 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 FZD9O00144 591 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 GMNNO75496 209 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 PGAM1P18669 254 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 ICAM3P32942 547 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 PRKD1Q15139 912 aaPredicted RBP8.36□□□□□ -1.07
HPS4-201ENST00000336873 NCBP2-AS2Q69YL0 99 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 ANO7Q6IWH7 933 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 ANGPTL8Q6UXH0 198 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 NAPRTQ6XQN6 538 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 GK5Q6ZS86 529 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 PSTKQ8IV42 348 aaKnown RBP8.36□□□□□ -1.07
HPS4-201ENST00000336873 ACVR1CQ8NER5 493 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 ZNF670Q9BS34 389 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 COLEC11Q9BWP8 271 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 GATA5Q9BWX5 397 aaPredicted RBP8.36□□□□□ -1.07
HPS4-201ENST00000336873 NDFIP2Q9NV92 336 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 RHBDL2Q9NX52 303 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 KCNK4Q9NYG8 393 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 COPG2Q9UBF2 871 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 FOCADQ5VW36 1801 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 FAM95CA0A1B0GW59 222 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 CXCL11O14625 94 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 MMP3P08254 477 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 CCNB1P14635 433 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 GGT5P36269 586 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 PIK3CGP48736 1102 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 LAMB3Q13751 1172 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 GALNT3Q14435 633 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 PFKFB4Q16877 469 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 ANKRD20A4Q4UJ75 823 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 TMTC4Q5T4D3 741 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 WLSQ5T9L3 541 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 FRMD7Q6ZUT3 714 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 C16orf59Q7L2K0 433 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 SLC45A3Q96JT2 553 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 DNAJC1Q96KC8 554 aaKnown RBP8.36□□□□□ -1.07
HPS4-201ENST00000336873 RPL10LQ96L21 214 aaKnown RBP8.36□□□□□ -1.07
HPS4-201ENST00000336873 SIGLEC10Q96LC7 697 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 EGFL8Q99944 293 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 EBF3Q9H4W6 596 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 SEMA4BQ9NPR2 832 aaPredicted RBP8.36□□□□□ -1.07
HPS4-201ENST00000336873 STYXL1Q9Y6J8 313 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 TLL2Q9Y6L7 1015 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 SLC12A8A0AV02 714 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 CBX4O00257 560 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 PLIN3O60664 434 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 DNAJA2O60884 412 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 RFPL1O75677 317 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 ALDOAP04075 364 aaKnown RBP8.36□□□□□ -1.07
HPS4-201ENST00000336873 PAMP19021 973 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 SERPINB8P50452 374 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 ZNF132P52740 706 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 KCNJ11Q14654 390 aa8.36□□□□□ -1.07
HPS4-201ENST00000336873 WASHC2DQ5SRD0 308 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms