RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 CASKIN2Q8WXE0 1202 aa16.14■□□□□ 0.17
MRPL55-202ENST00000336300 RUBCNQ92622 972 aa16.14■□□□□ 0.17
MRPL55-202ENST00000336300 SLC6A17Q9H1V8 727 aa16.14■□□□□ 0.17
MRPL55-202ENST00000336300 MTG2Q9H4K7 406 aa16.14■□□□□ 0.17
MRPL55-202ENST00000336300 FANCMQ8IYD8 2048 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 ALOX15BO15296 676 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 ZMPSTE24O75844 475 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 ADH1BP00325 375 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 IL1BP01584 269 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 GLDCP23378 1020 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 CD6P30203 668 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 SERPINB6P35237 376 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 MRE11P49959 708 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 TPMTP51580 245 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 HADHBP55084 474 aaKnown RBP16.13■□□□□ 0.17
MRPL55-202ENST00000336300 RPS14P62263 151 aaKnown RBP16.13■□□□□ 0.17
MRPL55-202ENST00000336300 RPL6Q02878 288 aaKnown RBP16.13■□□□□ 0.17
MRPL55-202ENST00000336300 IFI16Q16666 785 aaKnown RBP16.13■□□□□ 0.17
MRPL55-202ENST00000336300 TXNRD3NBQ6F5E7 133 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 CACUL1Q86Y37 369 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 MMAAQ8IVH4 418 aaKnown RBP16.13■□□□□ 0.17
MRPL55-202ENST00000336300 RHOT1Q8IXI2 618 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 STK40Q8N2I9 435 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 FAM160A2Q8N612 972 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-202ENST00000336300 PCDH20Q8N6Y1 951 aaKnown RBP16.13■□□□□ 0.17
MRPL55-202ENST00000336300 CSPG4P5Q96PW8 444 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 OMDQ99983 421 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 CALN1Q9BXU9 219 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 PCDH18Q9HCL0 1135 aa16.13■□□□□ 0.17
MRPL55-202ENST00000336300 USP36Q9P275 1121 aaKnown RBP16.13■□□□□ 0.17
MRPL55-202ENST00000336300 IGHV1OR15-9A0A0B4J2B8 117 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 C1QTNF3-AMACRE9PGA6 284 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 MCF2LO15068 1137 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 RETP07949 1114 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 C7P10643 843 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 DNA2P51530 1060 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 VAV2P52735 878 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 ARF5P84085 180 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 CCDC15Q0P6D6 951 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 KIF5AQ12840 1032 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 SERINC3Q13530 473 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 DPYSQ14117 519 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 CST6Q15828 149 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 INO80DQ53TQ3 878 aaPredicted RBP16.12■□□□□ 0.17
MRPL55-202ENST00000336300 LRRC38Q5VT99 294 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 Q6ZVU0 165 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 ASCL5Q7RTU5 278 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 ALYREFQ86V81 257 aaKnown RBP16.12■□□□□ 0.17
MRPL55-202ENST00000336300 ISG20Q96AZ6 181 aaKnown RBP16.12■□□□□ 0.17
MRPL55-202ENST00000336300 HMCESQ96FZ2 354 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 CELF6Q96J87 481 aaKnown RBP16.12■□□□□ 0.17
MRPL55-202ENST00000336300 FAM129BQ96TA1 746 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 MAK16Q9BXY0 300 aaKnown RBP16.12■□□□□ 0.17
MRPL55-202ENST00000336300 DUSP15Q9H1R2 295 aaPredicted RBP16.12■□□□□ 0.17
MRPL55-202ENST00000336300 NOL6Q9H6R4 1146 aaKnown RBP16.12■□□□□ 0.17
MRPL55-202ENST00000336300 LRRC19Q9H756 370 aa16.12■□□□□ 0.17
MRPL55-202ENST00000336300 DDX56Q9NY93 547 aaKnown RBP16.12■□□□□ 0.17
MRPL55-202ENST00000336300 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.12■□□□□ 0.17
MRPL55-202ENST00000336300 BTNL10A8MVZ5 291 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 K7ERQ8 282 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 DFFAO00273 331 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 SMAD6O43541 496 aaKnown RBP16.11■□□□□ 0.17
MRPL55-202ENST00000336300 C5AR1P21730 350 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 COMTP21964 271 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 AMPD1P23109 780 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 SLC8A1P32418 973 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 DPP6P42658 865 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 PSMD8P48556 350 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 PAPOLAP51003 745 aaKnown RBP16.11■□□□□ 0.17
MRPL55-202ENST00000336300 TAS2R40P59535 323 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 ATP13A4Q4VNC1 1196 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 CARD16Q5EG05 197 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 PMS2CLQ68D20 193 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 C22orf39Q6P5X5 142 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 USP30Q70CQ3 517 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 TMEM139Q8IV31 216 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 GPR161Q8N6U8 529 aaKnown RBP16.11■□□□□ 0.17
MRPL55-202ENST00000336300 ACRBPQ8NEB7 543 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 FAM71BQ8TC56 605 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 FOXJ1Q92949 421 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 TOE1Q96GM8 510 aaKnown RBP16.11■□□□□ 0.17
MRPL55-202ENST00000336300 ZNF670Q9BS34 389 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 SLC39A8Q9C0K1 460 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 BTBD1Q9H0C5 482 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 PABPC3Q9H361 631 aaKnown RBP16.11■□□□□ 0.17
MRPL55-202ENST00000336300 FBXL12Q9NXK8 326 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 MBD1Q9UIS9 605 aaPredicted RBP16.11■□□□□ 0.17
MRPL55-202ENST00000336300 PCDHGA5Q9Y5G8 931 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 ALG6Q9Y672 507 aa16.11■□□□□ 0.17
MRPL55-202ENST00000336300 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.1■□□□□ 0.17
MRPL55-202ENST00000336300 MID1O15344 667 aa16.1■□□□□ 0.17
MRPL55-202ENST00000336300 ARHGAP6O43182 974 aa16.1■□□□□ 0.17
MRPL55-202ENST00000336300 BUB1BO60566 1050 aaPredicted RBP16.1■□□□□ 0.17
MRPL55-202ENST00000336300 RNASEH2AO75792 299 aaKnown RBP16.1■□□□□ 0.17
MRPL55-202ENST00000336300 IGLV3-19P01714 112 aa16.1■□□□□ 0.17
MRPL55-202ENST00000336300 PRNPP04156 253 aa16.1■□□□□ 0.17
MRPL55-202ENST00000336300 TNNT1P13805 278 aa16.1■□□□□ 0.17
MRPL55-202ENST00000336300 VAV1P15498 845 aa16.1■□□□□ 0.17
MRPL55-202ENST00000336300 BCKDHBP21953 392 aa16.1■□□□□ 0.17
MRPL55-202ENST00000336300 KDELR1P24390 212 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms