RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 ALG1LQ6GMV1 187 aa8.75□□□□□ -1.01
TDP1-201ENST00000335725 DRICH1Q6PGQ1 229 aaPredicted RBP8.75□□□□□ -1.01
TDP1-201ENST00000335725 BTLAQ7Z6A9 289 aa8.75□□□□□ -1.01
TDP1-201ENST00000335725 DNAAF5Q86Y56 855 aa8.75□□□□□ -1.01
TDP1-201ENST00000335725 HID1Q8IV36 788 aa8.75□□□□□ -1.01
TDP1-201ENST00000335725 P3H2Q8IVL5 708 aa8.75□□□□□ -1.01
TDP1-201ENST00000335725 PRELID2Q8N945 189 aa8.75□□□□□ -1.01
TDP1-201ENST00000335725 GRK7Q8WTQ7 553 aa8.75□□□□□ -1.01
TDP1-201ENST00000335725 MTG1Q9BT17 334 aaPredicted RBP8.75□□□□□ -1.01
TDP1-201ENST00000335725 FETUBQ9UGM5 382 aa8.75□□□□□ -1.01
TDP1-201ENST00000335725 PRPF19Q9UMS4 504 aaKnown RBP8.75□□□□□ -1.01
TDP1-201ENST00000335725 DTX4Q9Y2E6 619 aa8.75□□□□□ -1.01
TDP1-201ENST00000335725 RPH3AQ9Y2J0 694 aaPredicted RBP8.75□□□□□ -1.01
TDP1-201ENST00000335725 MAP3K2Q9Y2U5 619 aa8.75□□□□□ -1.01
TDP1-201ENST00000335725 GMPPBQ9Y5P6 360 aa8.75□□□□□ -1.01
TDP1-201ENST00000335725 KIF13AQ9H1H9 1805 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 PRR5-ARHGAP8B1AHC4 643 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 B4E1Z4 1266 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 KLF11O14901 512 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 SLC22A2O15244 555 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 CFBP00751 764 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 PROCP04070 461 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 ITGB1P05556 798 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 SRCP12931 536 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 CYP11B1P15538 503 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 DDCP20711 480 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 ADRA1DP25100 572 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 RAP1GAPP47736 663 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 JAM2P57087 298 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 ARHGAP8P85298 464 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 BFSP2Q13515 415 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 CYP1B1Q16678 543 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 PRR16Q569H4 304 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 FAM76BQ5HYJ3 339 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 LDLRAP1Q5SW96 308 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 RHBDF2Q6PJF5 856 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 KCTD8Q6ZWB6 473 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 TXNDC2Q86VQ3 553 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 GRIN3AQ8TCU5 1115 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 ZNF416Q9BWM5 594 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 COQ3Q9NZJ6 369 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 NAGPAQ9UK23 515 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 AKAP10O43572 662 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 SPOPO43791 374 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 PROS1P07225 676 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 IL7P13232 177 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 ZNF26P17031 533 aaPredicted RBP8.74□□□□□ -1.01
TDP1-201ENST00000335725 EEF1B2P24534 225 aaKnown RBP8.74□□□□□ -1.01
TDP1-201ENST00000335725 IL6STP40189 918 aaPredicted RBP8.74□□□□□ -1.01
TDP1-201ENST00000335725 CAPZA2P47755 286 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 ASIC1P78348 528 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 RIN1Q13671 783 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 ZNF267Q14586 743 aaPredicted RBP8.74□□□□□ -1.01
TDP1-201ENST00000335725 MORF4L2Q15014 288 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 PKN2Q16513 984 aaKnown RBP8.74□□□□□ -1.01
TDP1-201ENST00000335725 ZC3H12BQ5HYM0 836 aaKnown RBP8.74□□□□□ -1.01
TDP1-201ENST00000335725 MPP7Q5T2T1 576 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 PIK3R6Q5UE93 754 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 DPY19L3Q6ZPD9 716 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 RASGRP3Q8IV61 690 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 SLC9A9Q8IVB4 645 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 PHC2Q8IXK0 858 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 DEFB107AQ8IZN7 70 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 TMEM35BQ8NCS4 154 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 OR13F1Q8NGS4 319 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 UFD1Q92890 307 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 PPP1R2P1Q96PQ5 205 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 MAGEF1Q9HAY2 307 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 PSMC3IPQ9P2W1 217 aaPredicted RBP8.74□□□□□ -1.01
TDP1-201ENST00000335725 GLS2Q9UI32 602 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 PTPN22Q9Y2R2 807 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 FAM237BA0A1B0GVD1 139 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 A0A1B0GWJ7 208 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 SAC3D1A6NKF1 404 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 ZNF780AO75290 641 aaPredicted RBP8.74□□□□□ -1.01
TDP1-201ENST00000335725 CLN5O75503 358 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 UPK1BO75841 260 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 CCNDBP1O95273 360 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 DNAJB1P25685 340 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 ERP29P30040 261 aaKnown RBP8.74□□□□□ -1.01
TDP1-201ENST00000335725 SSTR3P32745 418 aaPredicted RBP8.74□□□□□ -1.01
TDP1-201ENST00000335725 DGKQP52824 942 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 ACY1Q03154 408 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 ARID5AQ03989 594 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 FLOT2Q14254 428 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 RUNDC3AQ59EK9 446 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 GPIHBP1Q8IV16 184 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 NGLY1Q96IV0 654 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 ARPP21Q9UBL0 812 aaPredicted RBP8.74□□□□□ -1.01
TDP1-201ENST00000335725 SRP68Q9UHB9 627 aaKnown RBP8.74□□□□□ -1.01
TDP1-201ENST00000335725 GRIP1Q9Y3R0 1128 aa8.74□□□□□ -1.01
TDP1-201ENST00000335725 DEXIO95424 95 aa8.73□□□□□ -1.01
TDP1-201ENST00000335725 OR2B6P58173 313 aa8.73□□□□□ -1.01
TDP1-201ENST00000335725 TEKQ02763 1124 aa8.73□□□□□ -1.01
TDP1-201ENST00000335725 PPATQ06203 517 aa8.73□□□□□ -1.01
TDP1-201ENST00000335725 IKBKEQ14164 716 aa8.73□□□□□ -1.01
TDP1-201ENST00000335725 SIM2Q14190 667 aaPredicted RBP8.73□□□□□ -1.01
TDP1-201ENST00000335725 LTB4RQ15722 352 aa8.73□□□□□ -1.01
TDP1-201ENST00000335725 SGCAQ16586 387 aa8.73□□□□□ -1.01
TDP1-201ENST00000335725 CCNG2Q16589 344 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms