RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 CLPXO76031 633 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 CLTAP09496 248 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 SLC25A16P16260 332 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 RFX1P22670 979 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 CCNE1P24864 410 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 PCSK1P29120 753 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 DNAJA1P31689 397 aaKnown RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 FNTAP49354 379 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 SMTNP53814 917 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 FAM193AP78312 1265 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 CTAG1AP78358 180 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 TARDBPQ13148 414 aaKnown RBP eCLIP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 MFAP5Q13361 173 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 PDIA5Q14554 519 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 DHCR24Q15392 516 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 ZNF362Q5T0B9 420 aaPredicted RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 ARHGAP17Q68EM7 881 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 GSG1LQ6UXU4 331 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 GET4Q7L5D6 327 aaPredicted RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 TMEM110Q86TL2 294 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 GKN2Q86XP6 184 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 PRIMA1Q86XR5 153 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 SPATS2Q86XZ4 545 aaKnown RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 RAB43Q86YS6 212 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 ZDHHC23Q8IYP9 409 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 STKLD1Q8NE28 680 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 STK32AQ8WU08 396 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 PSPC1Q8WXF1 523 aaKnown RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 REPS1Q96D71 796 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 RRP36Q96EU6 259 aaKnown RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 LRRC46Q96FV0 321 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 LCORQ96JN0 433 aaPredicted RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 SLC41A2Q96JW4 573 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 MRGPRX3Q96LB0 322 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 ACO2Q99798 780 aaKnown RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 SOX7Q9BT81 388 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 GPR62Q9BZJ7 368 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 GAREM1Q9H706 876 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 ATP13A1Q9HD20 1204 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 SARS2Q9NP81 518 aaKnown RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 SPHK2Q9NRA0 654 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 KCNH7Q9NS40 1196 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 SETD4Q9NVD3 440 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 FANCLQ9NW38 375 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 TRNAU1APQ9NX07 287 aaKnown RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 SPATA7Q9P0W8 599 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 KIAA1257Q9ULG3 409 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 RNF112Q9ULX5 631 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 NCKAP1Q9Y2A7 1128 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 L3MBTL1Q9Y468 752 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 OTOGLQ3ZCN5 2332 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 DNAH2Q9P225 4427 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 CABIN1Q9Y6J0 2220 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 SPAARA0A1B0GVQ0 90 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 MEIS3P2A8K0S8 358 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 KRTAP9-7A8MTY7 169 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 CYP26A1O43174 497 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 EXTL3O43909 919 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 HCN1O60741 890 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 RNASEH1O60930 286 aaKnown RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 NDUFS2O75306 463 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 PDIA4P13667 645 aaKnown RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 LOXP28300 417 aaPredicted RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 GTF2H1P32780 548 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 CCR2P41597 374 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 CD86P42081 329 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 DCDC1P59894 354 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 RNASELQ05823 741 aaKnown RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 BIKQ13323 160 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 ITGB3BPQ13352 177 aaPredicted RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 PON2Q15165 354 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 MPPE1Q53F39 396 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 ARSHQ5FYA8 562 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 INTS6LQ5JSJ4 861 aaKnown RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 FKBP15Q5T1M5 1219 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 ALG1LQ6GMV1 187 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 TMEM71Q6P5X7 295 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 TAS1R3Q7RTX0 852 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 EFL1Q7Z2Z2 1120 aaKnown RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 GRASPQ7Z6J2 395 aaPredicted RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 SLC9B2Q86UD5 537 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 VSIG1Q86XK7 387 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 KIF18BQ86Y91 864 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 ZDHHC13Q8IUH4 622 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 CRYBG2Q8N1P7 616 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 RPLP0P6Q8NHW5 317 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 ABHD17AQ96GS6 310 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 SLC2A13Q96QE2 648 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 HINFPQ9BQA5 517 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 LDHAL6BQ9BYZ2 381 aaPredicted RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 C16orf95Q9H693 158 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 L2HGDHQ9H9P8 463 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 SMOXQ9NWM0 555 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 DUS2Q9NX74 493 aaKnown RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 CALCOCO1Q9P1Z2 691 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 LRWD1Q9UFC0 647 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 DDX25Q9UHL0 483 aaKnown RBP1.62□□□□□ -2.15
LINC00643-201ENST00000334389 MEMO1Q9Y316 297 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 NFS1Q9Y697 457 aa1.62□□□□□ -2.15
LINC00643-201ENST00000334389 ATRQ13535 2644 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms