RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 IKBKEQ14164 716 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 Q3C1V9 767 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 STEAP4Q687X5 459 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 CATSPERGQ6ZRH7 1159 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 ZBTB49Q6ZSB9 765 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 TMEM192Q8IY95 271 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 TMEM102Q8N9M5 508 aaPredicted RBP13.96□□□□□ -0.17
SYNE3-201ENST00000334258 SPATA13Q96N96 652 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 PPP1R16BQ96T49 567 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 TBCBQ99426 244 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 NOL11Q9H8H0 719 aaKnown RBP13.96□□□□□ -0.17
SYNE3-201ENST00000334258 TXNRD2Q9NNW7 524 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 TBC1D23Q9NUY8 699 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 FAIMQ9NVQ4 179 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 MORF4L1Q9UBU8 362 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 SLC39A10Q9ULF5 831 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 RAP2CQ9Y3L5 183 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 TMEM114B3SHH9 223 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 GOLGA8TH3BQL2 631 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 TK2O00142 265 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 MCF2P10911 925 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 ZFXP17010 805 aaPredicted RBP13.96□□□□□ -0.17
SYNE3-201ENST00000334258 NDST1P52848 882 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 PGGT1BP53609 377 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 SLC5A3P53794 718 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 GJC2Q5T442 439 aaPredicted RBP13.96□□□□□ -0.17
SYNE3-201ENST00000334258 LAYNQ6UX15 382 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 CHERPQ8IWX8 916 aaKnown RBP13.96□□□□□ -0.17
SYNE3-201ENST00000334258 C1orf127Q8N9H9 656 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 TEX13BQ9BXU2 312 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 B3GNT5Q9BYG0 378 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 PNPLA3Q9NST1 481 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 SSC5DA1L4H1 1573 aa13.96□□□□□ -0.17
SYNE3-201ENST00000334258 G3V2L1 256 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 RNF103O00237 685 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 B4GALT5O43286 388 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 CKMT2P17540 419 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 PSMB4P28070 264 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 IFRD2Q12894 506 aaPredicted RBP13.96□□□□□ -0.18
SYNE3-201ENST00000334258 MTX3Q5HYI7 312 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 EEF1DP3Q658K8 133 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 ZBTB46Q86UZ6 589 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 LRRC43Q8N309 656 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 URGCPQ8TCY9 931 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 ARNTL2Q8WYA1 636 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 SLC29A1Q99808 456 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 NAT9Q9BTE0 207 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 ACE2Q9BYF1 805 aaPredicted RBP13.96□□□□□ -0.18
SYNE3-201ENST00000334258 ADARB2Q9NS39 739 aaKnown RBP13.96□□□□□ -0.18
SYNE3-201ENST00000334258 DTLQ9NZJ0 730 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 EBF1Q9UH73 591 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 SIX4Q9UIU6 781 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 AP4E1Q9UPM8 1137 aa13.96□□□□□ -0.18
SYNE3-201ENST00000334258 H3BNH8 94 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 RALGDSQ12967 914 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 GOLGA7BQ2TAP0 167 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 USP41Q3LFD5 358 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 ANKDD1AQ495B1 522 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 SMUG1Q53HV7 270 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 GLRA4Q5JXX5 417 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 ATF7IP2Q5U623 682 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 PID1Q7Z2X4 250 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 UNKQ9C0B0 810 aaKnown RBP13.95□□□□□ -0.18
SYNE3-201ENST00000334258 CLK4Q9HAZ1 481 aaKnown RBP13.95□□□□□ -0.18
SYNE3-201ENST00000334258 MAFBQ9Y5Q3 323 aaPredicted RBP13.95□□□□□ -0.18
SYNE3-201ENST00000334258 SQORQ9Y6N5 450 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 SYNJ2BP-COX16A0A087WUM0 186 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 KCNU1A8MYU2 1149 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 SPATA31C2B4DYI2 1134 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 TRIM38O00635 465 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 AKAP10O43572 662 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 MLNP12872 115 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 ARL4AP40617 200 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 STAT5BP51692 787 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 PSME3P61289 254 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 LAMTOR4Q0VGL1 99 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 TMEM53Q6P2H8 277 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 TTC33Q6PID6 262 aaPredicted RBP13.95□□□□□ -0.18
SYNE3-201ENST00000334258 ABHD8Q96I13 439 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 CNDP1Q96KN2 507 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 QKIQ96PU8 341 aaKnown RBP eCLIP13.95□□□□□ -0.18
SYNE3-201ENST00000334258 EFHD1Q9BUP0 239 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 SLC2A11Q9BYW1 496 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 MTMR10Q9NXD2 777 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 COX16Q9P0S2 106 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 ZDHHC2Q9UIJ5 367 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 PAPSS1O43252 624 aaPredicted RBP13.95□□□□□ -0.18
SYNE3-201ENST00000334258 NFKBIAP25963 317 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 VARSP26640 1264 aaKnown RBP13.95□□□□□ -0.18
SYNE3-201ENST00000334258 EPHX2P34913 555 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 NAB1Q13506 487 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 PMF1Q6P1K2 205 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 MPZL3Q6UWV2 235 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 GK5Q6ZS86 529 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 FASTKD5Q7L8L6 764 aaKnown RBP13.95□□□□□ -0.18
SYNE3-201ENST00000334258 HERC6Q8IVU3 1022 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.95□□□□□ -0.18
SYNE3-201ENST00000334258 OR52K1Q8NGK4 314 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 HPDLQ96IR7 371 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 RBBP8Q99708 897 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms