RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.71■□□□□ 0.43
DDX28-201ENST00000332395 NSL1Q96IY1 281 aa17.71■□□□□ 0.43
DDX28-201ENST00000332395 C8orf48Q96LL4 319 aa17.71■□□□□ 0.43
DDX28-201ENST00000332395 TBL1YQ9BQ87 522 aa17.71■□□□□ 0.43
DDX28-201ENST00000332395 KIFC1Q9BW19 673 aa17.71■□□□□ 0.43
DDX28-201ENST00000332395 WWP1Q9H0M0 922 aa17.71■□□□□ 0.43
DDX28-201ENST00000332395 L3MBTL1Q9Y468 752 aa17.71■□□□□ 0.43
DDX28-201ENST00000332395 TADA2AO75478 443 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 ANXA9O76027 345 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 NRG1Q02297 640 aaPredicted RBP17.7■□□□□ 0.42
DDX28-201ENST00000332395 NOGQ13253 232 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 KRT72Q14CN4 511 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 AFMIDQ63HM1 303 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 IPMKQ8NFU5 416 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 ZNF778Q96MU6 729 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 FBXO44Q9H4M3 255 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 TLE6Q9H808 572 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 IARS2Q9NSE4 1012 aaKnown RBP17.7■□□□□ 0.42
DDX28-201ENST00000332395 NOP53Q9NZM5 478 aaKnown RBP17.7■□□□□ 0.42
DDX28-201ENST00000332395 COPG2Q9UBF2 871 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 TLR6Q9Y2C9 796 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 NYNRINQ9P2P1 1898 aaKnown RBP17.7■□□□□ 0.42
DDX28-201ENST00000332395 PLXNA3P51805 1871 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 A0A1W2PQ45 241 aaPredicted RBP17.7■□□□□ 0.42
DDX28-201ENST00000332395 A0A1W2PQY0 241 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 GOLGA8TH3BQL2 631 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 SYN3O14994 580 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 TIMM44O43615 452 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 ITM2AO43736 263 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 CCDC22O60826 627 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 ABCG1P45844 678 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 CSE1LP55060 971 aaKnown RBP17.7■□□□□ 0.42
DDX28-201ENST00000332395 MLLT6P55198 1093 aaPredicted RBP17.7■□□□□ 0.42
DDX28-201ENST00000332395 USP46P62068 366 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 PIK3R6Q5UE93 754 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 FAM91A1Q658Y4 838 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 TIGD7Q6NT04 549 aaPredicted RBP17.7■□□□□ 0.42
DDX28-201ENST00000332395 MSANTD2Q6P1R3 559 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 C10orf107Q8IVU9 208 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 SLC39A13Q96H72 371 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 MCMBPQ9BTE3 642 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 ZNF358Q9NW07 568 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 PCDHB5Q9Y5E4 795 aa17.7■□□□□ 0.42
DDX28-201ENST00000332395 CCDC78A2IDD5 438 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 LYPLA1O75608 230 aaPredicted RBP17.69■□□□□ 0.42
DDX28-201ENST00000332395 HLA-DQB2P05538 268 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 CALB2P22676 271 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 CCND1P24385 295 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 SLC1A6P48664 564 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 CCDC153Q494R4 210 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 FAM13CQ8NE31 585 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 C1orf74Q96LT6 269 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 MIPEPQ99797 713 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 CAB39LQ9H9S4 337 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 STARD7Q9NQZ5 370 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 GMIPQ9P107 970 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 ARMCX1Q9P291 453 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 A0A096LPK6 155 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 WFS1O76024 890 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 SERPINE1P05121 402 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 PAPOLAP51003 745 aaKnown RBP17.69■□□□□ 0.42
DDX28-201ENST00000332395 GEMP55040 296 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 CTXN3Q4LDR2 81 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 PCID2Q5JVF3 399 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 PDPK2PQ6A1A2 396 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 PLD6Q8N2A8 252 aaKnown RBP17.69■□□□□ 0.42
DDX28-201ENST00000332395 ARHGAP18Q8N392 663 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 SLC43A3Q8NBI5 491 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 PIWIL2Q8TC59 973 aaKnown RBP17.69■□□□□ 0.42
DDX28-201ENST00000332395 CD99L2Q8TCZ2 262 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 VPS39Q96JC1 886 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 BTBD10Q9BSF8 475 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 TSEN34Q9BSV6 310 aaKnown RBP17.69■□□□□ 0.42
DDX28-201ENST00000332395 FICDQ9BVA6 458 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 FTHL17Q9BXU8 183 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 RBM22Q9NW64 420 aaKnown RBP eCLIP17.69■□□□□ 0.42
DDX28-201ENST00000332395 TMEM161AQ9NX61 479 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 VWA8A3KMH1 1905 aa17.69■□□□□ 0.42
DDX28-201ENST00000332395 WASH4PA8MWX3 477 aa17.68■□□□□ 0.42
DDX28-201ENST00000332395 MPOP05164 745 aa17.68■□□□□ 0.42
DDX28-201ENST00000332395 SLC2A3P11169 496 aa17.68■□□□□ 0.42
DDX28-201ENST00000332395 HOXD10P28358 340 aa17.68■□□□□ 0.42
DDX28-201ENST00000332395 POU6F1Q14863 301 aa17.68■□□□□ 0.42
DDX28-201ENST00000332395 DLG2Q15700 870 aa17.68■□□□□ 0.42
DDX28-201ENST00000332395 DENND5AQ6IQ26 1287 aa17.68■□□□□ 0.42
DDX28-201ENST00000332395 PKN3Q6P5Z2 889 aa17.68■□□□□ 0.42
DDX28-201ENST00000332395 LRRC49Q8IUZ0 686 aa17.68■□□□□ 0.42
DDX28-201ENST00000332395 WDR75Q8IWA0 830 aaKnown RBP17.68■□□□□ 0.42
DDX28-201ENST00000332395 TTC9BQ8N6N2 239 aa17.68■□□□□ 0.42
DDX28-201ENST00000332395 ATAD1Q8NBU5 361 aa17.68■□□□□ 0.42
DDX28-201ENST00000332395 RAET1EQ8TD07 263 aa17.68■□□□□ 0.42
DDX28-201ENST00000332395 PPARGC1AQ9UBK2 798 aaKnown RBP17.68■□□□□ 0.42
DDX28-201ENST00000332395 DNAJC16Q9Y2G8 782 aa17.68■□□□□ 0.42
DDX28-201ENST00000332395 GRK2P25098 689 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 MAGEA11P43364 429 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 TBX4P57082 545 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 FAM171A1Q5VUB5 890 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 CLEC14AQ86T13 490 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 GPR152Q8TDT2 470 aa17.67■□□□□ 0.42
DDX28-201ENST00000332395 PPP1R2P1Q96PQ5 205 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms