RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 NSMCE2Q96MF7 247 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 ZCCHC2Q9C0B9 1178 aaKnown RBP10.71□□□□□ -0.69
CLN8-201ENST00000331222 MARCH2Q9P0N8 246 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 SLC12A4Q9UP95 1085 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 RGS14O43566 566 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 MPOP05164 745 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 HDCP19113 662 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 SUZ12Q15022 739 aaKnown RBP10.71□□□□□ -0.69
CLN8-201ENST00000331222 PTPAQ15257 358 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 PSRC1Q6PGN9 363 aaPredicted RBP10.71□□□□□ -0.69
CLN8-201ENST00000331222 GCNT7Q6ZNI0 430 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 TXNRD3Q86VQ6 643 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 AGBL3Q8NEM8 1001 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 VPS33AQ96AX1 596 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 SUCOQ9UBS9 1254 aaKnown RBP10.71□□□□□ -0.69
CLN8-201ENST00000331222 CDC42BPAQ5VT25 1732 aa10.71□□□□□ -0.69
CLN8-201ENST00000331222 TISP43B9A030 160 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 VPS4BO75351 444 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 ERAL1O75616 437 aaKnown RBP10.71□□□□□ -0.7
CLN8-201ENST00000331222 FASP25445 335 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 PSMB4P28070 264 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 ALDH5A1P51649 535 aaPredicted RBP10.71□□□□□ -0.7
CLN8-201ENST00000331222 WDR93Q6P2C0 686 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 SELENOMQ8WWX9 145 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 NEK6Q9HC98 313 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 DPP7Q9UHL4 492 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 DCXO43602 365 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 RTN3O95197 1032 aaPredicted RBP10.71□□□□□ -0.7
CLN8-201ENST00000331222 CXCL14O95715 111 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 CYP4B1P13584 511 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 HNMTP50135 292 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 CASP9P55211 416 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 ZNHIT3Q15649 155 aaPredicted RBP10.71□□□□□ -0.7
CLN8-201ENST00000331222 TAF8Q7Z7C8 310 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 ZNF605Q86T29 641 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 ITFG1Q8TB96 612 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 PCDHA11Q9Y5I1 949 aa10.71□□□□□ -0.7
CLN8-201ENST00000331222 TPP1O14773 563 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 CD3EAPO15446 510 aaKnown RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 BANF1O75531 89 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 NQO1P15559 274 aaKnown RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 JAK1P23458 1154 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 NTSP30990 170 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 RENBPP51606 427 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 POLR2LP62875 67 aaKnown RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 MRPS35P82673 323 aaKnown RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 ACAP1Q15027 740 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 ZC3H12AQ5D1E8 599 aaKnown RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 ULK3Q6PHR2 472 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 EPB41L4BQ9H329 900 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 VAV3Q9UKW4 847 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 E5RJQ4 531 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 ERVK-9P63128 1117 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 PEG10Q86TG7 708 aaKnown RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 STX12Q86Y82 276 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 P2RX7Q99572 595 aaKnown RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 CLEC4MQ9H2X3 399 aaPredicted RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 ASAH2Q9NR71 780 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 MORC2Q9Y6X9 1032 aaPredicted RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 AREL1O15033 823 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 SEPT4O43236 478 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 FBXO21O94952 628 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 KCNH1O95259 989 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 S100A3P33764 101 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 SMU1Q2TAY7 513 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 GRTP1Q5TC63 336 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 ZNF571Q7Z3V5 609 aaPredicted RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 FAM220AQ7Z4H9 259 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 PNPT1Q8TCS8 783 aaKnown RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 ING5Q8WYH8 240 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 MARCH7Q9H992 704 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 ADPRHL2Q9NX46 363 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 SIRPGQ9P1W8 387 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 DMGDHQ9UI17 866 aaKnown RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 CDH9Q9ULB4 789 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 CAPN6Q9Y6Q1 641 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 TRPM1Q7Z4N2 1603 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 MYO3AQ8NEV4 1616 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 SH3D21A4FU49 640 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 PRODHO43272 600 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 ANXA5P08758 320 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 PTPN5P54829 565 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 MPPE1Q53F39 396 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 XKR6Q5GH73 641 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 PCDH20Q8N6Y1 951 aaKnown RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 SMPDL3BQ92485 455 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 PAIP1Q9H074 479 aaKnown RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 TCF7L2Q9NQB0 619 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 IMP3Q9NV31 184 aaKnown RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 LMTK2Q8IWU2 1503 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 F8VZ95 297 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 ATP9AO75110 1047 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 NR2F1P10589 423 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 ARF4P18085 180 aaPredicted RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 CLK3P49761 638 aaKnown RBP10.7□□□□□ -0.7
CLN8-201ENST00000331222 RFX4Q33E94 735 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 HYIQ5T013 277 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 FAM151BQ6UXP7 276 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 REPS2Q8NFH8 660 aa10.7□□□□□ -0.7
CLN8-201ENST00000331222 DNAJB14Q8TBM8 379 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms