RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 PABPC3Q9H361 631 aaKnown RBP16.19■□□□□ 0.18
PDGFB-201ENST00000331163 WDR6Q9NNW5 1121 aaKnown RBP16.19■□□□□ 0.18
PDGFB-201ENST00000331163 GRHL1Q9NZI5 618 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 GGA2Q9UJY4 613 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 EYSQ5T1H1 3165 aa16.19■□□□□ 0.18
PDGFB-201ENST00000331163 PTPRZ1P23471 2315 aaPredicted RBP16.19■□□□□ 0.18
PDGFB-201ENST00000331163 FAM155BO75949 473 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 AGTP01019 485 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 TGM2P21980 687 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 VIPR2P41587 438 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 ZNF567Q8N184 647 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 ANKLE1Q8NAG6 615 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 ABHD8Q96I13 439 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 ZNF334Q9HCZ1 680 aaPredicted RBP16.18■□□□□ 0.18
PDGFB-201ENST00000331163 NINJ2Q9NZG7 142 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 URB1O60287 2271 aaKnown RBP16.18■□□□□ 0.18
PDGFB-201ENST00000331163 UBA6A0AVT1 1052 aaPredicted RBP16.18■□□□□ 0.18
PDGFB-201ENST00000331163 HHLA1C9JL84 531 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 CES2O00748 559 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 ARHGEF15O94989 841 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 GKP32189 559 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 KLF1Q13351 362 aaPredicted RBP16.18■□□□□ 0.18
PDGFB-201ENST00000331163 PTK6Q13882 451 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 GALNT3Q14435 633 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 PIK3R6Q5UE93 754 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 RNF217Q8TC41 542 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 AGR3Q8TD06 166 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 TTC28Q96AY4 2481 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 ZNF840PA6NDX5 716 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 CXCL10P02778 98 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 XPAP23025 273 aaPredicted RBP16.18■□□□□ 0.18
PDGFB-201ENST00000331163 PGGT1BP53609 377 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 DSC2Q02487 901 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 ARHGAP15Q53QZ3 475 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 TLDC1Q6P9B6 456 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 CHRDL2Q6WN34 429 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 CCDC149Q6ZUS6 474 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 KCNN1Q92952 543 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 BTN2A3PQ96KV6 586 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 SEMA3CQ99985 751 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 C11orf84Q9BUA3 381 aaPredicted RBP16.18■□□□□ 0.18
PDGFB-201ENST00000331163 CINPQ9BW66 212 aaPredicted RBP16.18■□□□□ 0.18
PDGFB-201ENST00000331163 CPSF2Q9P2I0 782 aaKnown RBP16.18■□□□□ 0.18
PDGFB-201ENST00000331163 SCML2Q9UQR0 700 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 PCDHGC4Q9Y5F7 938 aa16.18■□□□□ 0.18
PDGFB-201ENST00000331163 LINC01553A4QN01 128 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 SMIM24O75264 130 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 GJB3O75712 270 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 ERVK-10P10266 1014 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 VAV1P15498 845 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 SLC10A7Q0GE19 358 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 MSS51Q4VC12 460 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 LACTB2Q53H82 288 aaPredicted RBP16.17■□□□□ 0.18
PDGFB-201ENST00000331163 MS4A13Q5J8X5 152 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 HHATQ5VTY9 493 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 SH3RF2Q8TEC5 729 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 WBP2Q969T9 261 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 OSBPL1AQ9BXW6 950 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 ZFATQ9P243 1243 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 NEMP1O14524 444 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 KIAA0355O15063 1070 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 TBC1D4O60343 1298 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 SUN1O94901 812 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 BRAFP15056 766 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 STX2P32856 288 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 RABGAP1LQ5R372 815 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 ZDHHC24Q6UX98 284 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 MPP5Q8N3R9 675 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 C8orf48Q96LL4 319 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 SEZ6LQ9BYH1 1024 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 BPIFA1Q9NP55 256 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 C20orf96Q9NUD7 363 aaPredicted RBP16.17■□□□□ 0.18
PDGFB-201ENST00000331163 MTMR10Q9NXD2 777 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 CLDND1Q9NY35 253 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 FIS1Q9Y3D6 152 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 TRAV19A0A0A6YYK7 116 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 TRIM24O15164 1050 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 MT-ND3P03897 115 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 PRAMEP78395 509 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 YAF2Q8IY57 180 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 TTC17Q96AE7 1141 aa16.17■□□□□ 0.18
PDGFB-201ENST00000331163 RIPK2O43353 540 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 NCALDP61601 193 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 THOC5Q13769 683 aaKnown RBP16.16■□□□□ 0.18
PDGFB-201ENST00000331163 HSP90AA5PQ58FG0 334 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 ATXN7L2Q5T6C5 722 aaPredicted RBP16.16■□□□□ 0.18
PDGFB-201ENST00000331163 ITPRIPL1Q6GPH6 555 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 PTAR1Q7Z6K3 402 aaPredicted RBP16.16■□□□□ 0.18
PDGFB-201ENST00000331163 LDB1Q86U70 411 aaPredicted RBP16.16■□□□□ 0.18
PDGFB-201ENST00000331163 SLC35B2Q8TB61 432 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 OLA1Q9NTK5 396 aaKnown RBP16.16■□□□□ 0.18
PDGFB-201ENST00000331163 RRN3Q9NYV6 651 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 FCF1Q9Y324 198 aaKnown RBP16.16■□□□□ 0.18
PDGFB-201ENST00000331163 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.16■□□□□ 0.18
PDGFB-201ENST00000331163 HCFC2Q9Y5Z7 792 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 MAP1BP46821 2468 aaKnown RBP16.16■□□□□ 0.18
PDGFB-201ENST00000331163 TMEM120BA0PK00 339 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 C5orf60A6NFR6 353 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 H3BQ06 376 aaPredicted RBP16.16■□□□□ 0.18
PDGFB-201ENST00000331163 ACSL4O60488 711 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms