RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 TSGA13Q96PP4 275 aa25.45■■□□□ 1.66
CDPF1-201ENST00000314567 SELENOSQ9BQE4 189 aa25.45■■□□□ 1.66
CDPF1-201ENST00000314567 TASP1Q9H6P5 420 aa25.45■■□□□ 1.66
CDPF1-201ENST00000314567 PSMC3IPQ9P2W1 217 aaPredicted RBP25.45■■□□□ 1.66
CDPF1-201ENST00000314567 GREM1O60565 184 aa25.44■■□□□ 1.66
CDPF1-201ENST00000314567 FGF19O95750 216 aa25.44■■□□□ 1.66
CDPF1-201ENST00000314567 SLC7A9P82251 487 aa25.44■■□□□ 1.66
CDPF1-201ENST00000314567 ARHGAP15Q53QZ3 475 aa25.44■■□□□ 1.66
CDPF1-201ENST00000314567 FAM133BQ5BKY9 247 aaKnown RBP25.44■■□□□ 1.66
CDPF1-201ENST00000314567 PRPF38BQ5VTL8 546 aaKnown RBP25.44■■□□□ 1.66
CDPF1-201ENST00000314567 Q7L0L9 218 aa25.44■■□□□ 1.66
CDPF1-201ENST00000314567 PID1Q7Z2X4 250 aa25.44■■□□□ 1.66
CDPF1-201ENST00000314567 GPR149Q86SP6 731 aa25.44■■□□□ 1.66
CDPF1-201ENST00000314567 CIR1Q86X95 450 aaPredicted RBP25.44■■□□□ 1.66
CDPF1-201ENST00000314567 RTL3Q8N8U3 475 aaKnown RBP25.44■■□□□ 1.66
CDPF1-201ENST00000314567 LEMD2Q8NC56 503 aa25.44■■□□□ 1.66
CDPF1-201ENST00000314567 FBF1Q8TES7 1133 aa25.44■■□□□ 1.66
CDPF1-201ENST00000314567 PRMT1Q99873 361 aaKnown RBP25.44■■□□□ 1.66
CDPF1-201ENST00000314567 LMCD1Q9NZU5 365 aa25.44■■□□□ 1.66
CDPF1-201ENST00000314567 CFAP97Q9P2B7 532 aa25.44■■□□□ 1.66
CDPF1-201ENST00000314567 TMEM265A0A087WTH1 108 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 POC1B-GALNT4F8VUJ3 575 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 KCNK1O00180 336 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 PAPLNO95428 1278 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 PSMB4P28070 264 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 STX2P32856 288 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 TTC19Q6DKK2 380 aaPredicted RBP25.43■■□□□ 1.66
CDPF1-201ENST00000314567 FBXL22Q6P050 247 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 CHSY1Q86X52 802 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 IGDCC3Q8IVU1 814 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 ZNF683Q8IZ20 524 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 MAML1Q92585 1016 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 IGSF8Q969P0 613 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 CYTH2Q99418 400 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 SENP1Q9P0U3 644 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 PPARGC1AQ9UBK2 798 aaKnown RBP25.43■■□□□ 1.66
CDPF1-201ENST00000314567 NUP205Q92621 2012 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 ACSL4O60488 711 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 AVILO75366 819 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 CPP00450 1065 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 CCNCP24863 283 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 AVPR1AP37288 418 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 TMED2Q15363 201 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 LRRC8BQ6P9F7 803 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 LRRC49Q8IUZ0 686 aa25.43■■□□□ 1.66
CDPF1-201ENST00000314567 USP13Q92995 863 aaPredicted RBP25.43■■□□□ 1.66
CDPF1-201ENST00000314567 ERI2A8K979 691 aaKnown RBP25.42■■□□□ 1.66
CDPF1-201ENST00000314567 LEFTY2O00292 366 aa25.42■■□□□ 1.66
CDPF1-201ENST00000314567 ZNF197O14709 1029 aa25.42■■□□□ 1.66
CDPF1-201ENST00000314567 LTBRP36941 435 aa25.42■■□□□ 1.66
CDPF1-201ENST00000314567 SGSHP51688 502 aa25.42■■□□□ 1.66
CDPF1-201ENST00000314567 MTM1Q13496 603 aa25.42■■□□□ 1.66
CDPF1-201ENST00000314567 LRRC31Q6UY01 552 aa25.42■■□□□ 1.66
CDPF1-201ENST00000314567 GET4Q7L5D6 327 aaPredicted RBP25.42■■□□□ 1.66
CDPF1-201ENST00000314567 ARHGAP12Q8IWW6 846 aa25.42■■□□□ 1.66
CDPF1-201ENST00000314567 CFAP52Q8N1V2 620 aa25.42■■□□□ 1.66
CDPF1-201ENST00000314567 AGGF1Q8N302 714 aaeCLIP25.42■■□□□ 1.66
CDPF1-201ENST00000314567 ATPAF2Q8N5M1 289 aa25.42■■□□□ 1.66
CDPF1-201ENST00000314567 DHRS4Q9BTZ2 278 aa25.42■■□□□ 1.66
CDPF1-201ENST00000314567 CEP41Q9BYV8 373 aa25.42■■□□□ 1.66
CDPF1-201ENST00000314567 GBA3Q9H227 469 aa25.42■■□□□ 1.66
CDPF1-201ENST00000314567 NDFIP2Q9NV92 336 aa25.42■■□□□ 1.66
CDPF1-201ENST00000314567 ZC3H7BQ9UGR2 993 aaKnown RBP25.42■■□□□ 1.66
CDPF1-201ENST00000314567 TBK1Q9UHD2 729 aa25.42■■□□□ 1.66
CDPF1-201ENST00000314567 DOCK4Q8N1I0 1966 aa25.41■■□□□ 1.66
CDPF1-201ENST00000314567 SHROOM3Q8TF72 1996 aa25.41■■□□□ 1.66
CDPF1-201ENST00000314567 CNTN5O94779 1100 aa25.41■■□□□ 1.66
CDPF1-201ENST00000314567 TACR2P21452 398 aa25.41■■□□□ 1.66
CDPF1-201ENST00000314567 CTC1Q2NKJ3 1217 aa25.41■■□□□ 1.66
CDPF1-201ENST00000314567 TEX44Q53QW1 395 aa25.41■■□□□ 1.66
CDPF1-201ENST00000314567 ALFQ53S48 1182 aa25.41■■□□□ 1.66
CDPF1-201ENST00000314567 AFMIDQ63HM1 303 aa25.41■■□□□ 1.66
CDPF1-201ENST00000314567 CYP4X1Q8N118 509 aa25.41■■□□□ 1.66
CDPF1-201ENST00000314567 PDCD7Q8N8D1 485 aaKnown RBP25.41■■□□□ 1.66
CDPF1-201ENST00000314567 SH3RF2Q8TEC5 729 aa25.41■■□□□ 1.66
CDPF1-201ENST00000314567 CELF6Q96J87 481 aaKnown RBP25.41■■□□□ 1.66
CDPF1-201ENST00000314567 SIGLEC10Q96LC7 697 aa25.41■■□□□ 1.66
CDPF1-201ENST00000314567 XPO6Q96QU8 1125 aaKnown RBP25.41■■□□□ 1.66
CDPF1-201ENST00000314567 TSPAN3O60637 253 aa25.4■■□□□ 1.66
CDPF1-201ENST00000314567 LGI2Q8N0V4 545 aa25.4■■□□□ 1.66
CDPF1-201ENST00000314567 EBNA1BP2Q99848 306 aaKnown RBP25.4■■□□□ 1.66
CDPF1-201ENST00000314567 EPN3Q9H201 632 aa25.4■■□□□ 1.66
CDPF1-201ENST00000314567 S1PR5Q9H228 398 aa25.4■■□□□ 1.66
CDPF1-201ENST00000314567 RSPH14Q9UHP6 348 aa25.4■■□□□ 1.66
CDPF1-201ENST00000314567 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.4■■□□□ 1.66
CDPF1-201ENST00000314567 TCRBV9S1A1TA0A576 114 aa25.4■■□□□ 1.66
CDPF1-201ENST00000314567 CHN1P15882 459 aa25.4■■□□□ 1.66
CDPF1-201ENST00000314567 RHOQP17081 205 aa25.4■■□□□ 1.66
CDPF1-201ENST00000314567 FSHRP23945 695 aa25.4■■□□□ 1.66
CDPF1-201ENST00000314567 DDX6P26196 483 aaKnown RBP eCLIP25.4■■□□□ 1.66
CDPF1-201ENST00000314567 SLC11A2P49281 568 aa25.4■■□□□ 1.66
CDPF1-201ENST00000314567 TIGD7Q6NT04 549 aaPredicted RBP25.4■■□□□ 1.66
CDPF1-201ENST00000314567 ADGRD1Q6QNK2 874 aa25.4■■□□□ 1.66
CDPF1-201ENST00000314567 TFAP2DQ7Z6R9 452 aa25.4■■□□□ 1.66
CDPF1-201ENST00000314567 NPAS3Q8IXF0 933 aa25.4■■□□□ 1.66
CDPF1-201ENST00000314567 ZSCAN18Q8TBC5 510 aaPredicted RBP25.4■■□□□ 1.66
CDPF1-201ENST00000314567 TEKT5Q96M29 485 aa25.4■■□□□ 1.66
CDPF1-201ENST00000314567 PRICKLE1Q96MT3 831 aaPredicted RBP25.4■■□□□ 1.66
CDPF1-201ENST00000314567 PAFAH2Q99487 392 aa25.4■■□□□ 1.66
CDPF1-201ENST00000314567 ZYG11BQ9C0D3 744 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms