RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 MLPHQ9BV36 600 aaPredicted RBP13.9□□□□□ -0.18
DDX54-202ENST00000314045 GPR88Q9GZN0 384 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 TAS2R13Q9NYV9 303 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 LAMA4Q16363 1823 aa13.9□□□□□ -0.18
DDX54-202ENST00000314045 TCRBV9S1A1TA0A576 114 aa13.9□□□□□ -0.19
DDX54-202ENST00000314045 ANGPT2O15123 496 aa13.9□□□□□ -0.19
DDX54-202ENST00000314045 DDHD2O94830 711 aa13.9□□□□□ -0.19
DDX54-202ENST00000314045 ZNF7P17097 686 aaPredicted RBP13.9□□□□□ -0.19
DDX54-202ENST00000314045 PROZP22891 400 aa13.9□□□□□ -0.19
DDX54-202ENST00000314045 PTGIRP43119 386 aa13.9□□□□□ -0.19
DDX54-202ENST00000314045 CDK18Q07002 472 aa13.9□□□□□ -0.19
DDX54-202ENST00000314045 C6orf10Q5SRN2 563 aa13.9□□□□□ -0.19
DDX54-202ENST00000314045 CNKSR3Q6P9H4 555 aa13.9□□□□□ -0.19
DDX54-202ENST00000314045 PRCCQ92733 491 aaPredicted RBP13.9□□□□□ -0.19
DDX54-202ENST00000314045 MRPL40Q9NQ50 206 aaKnown RBP13.9□□□□□ -0.19
DDX54-202ENST00000314045 SCN9AQ15858 1988 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 ACSL4O60488 711 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 ITGBL1O95965 494 aaPredicted RBP13.89□□□□□ -0.19
DDX54-202ENST00000314045 ITGB6P18564 788 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 KCNA4P22459 653 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 SLC11A1P49279 550 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 SNRPD1P62314 119 aaKnown RBP13.89□□□□□ -0.19
DDX54-202ENST00000314045 OLFML1Q6UWY5 402 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 NCLNQ969V3 563 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 CENPKQ9BS16 269 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 LRRC4CQ9HCJ2 640 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 AGO1Q9UL18 857 aaKnown RBP13.89□□□□□ -0.19
DDX54-202ENST00000314045 UBR3Q6ZT12 1888 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 ENO3P13929 434 aaPredicted RBP13.89□□□□□ -0.19
DDX54-202ENST00000314045 CRABP2P29373 138 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 DPYSL2Q16555 572 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 HFE2Q6ZVN8 426 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 SZRD1Q7Z422 152 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 ZNF280BQ86YH2 543 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 FZD10Q9ULW2 581 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 SQORQ9Y6N5 450 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 SHANK3Q9BYB0 1731 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 SLC38A8A6NNN8 435 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 ENPP3O14638 875 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 TRIM13O60858 407 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 C1RP00736 705 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 ERFP50548 548 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 IL1RL1Q01638 556 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 CNGA3Q16281 694 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 DCAF12L1Q5VU92 463 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 C16orf46Q6P387 395 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 DRICH1Q6PGQ1 229 aaPredicted RBP13.89□□□□□ -0.19
DDX54-202ENST00000314045 CACUL1Q86Y37 369 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 C2orf15Q8WU43 125 aaKnown RBP13.89□□□□□ -0.19
DDX54-202ENST00000314045 KCTD13Q8WZ19 329 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 CMTM5Q96DZ9 223 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 PHF21BQ96EK2 531 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 QKIQ96PU8 341 aaKnown RBP eCLIP13.89□□□□□ -0.19
DDX54-202ENST00000314045 DTLQ9NZJ0 730 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 PCDHA11Q9Y5I1 949 aa13.89□□□□□ -0.19
DDX54-202ENST00000314045 AIM2O14862 343 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 TBX18O95935 607 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 TPBGLP0DKB5 382 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 AQP5P55064 265 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 STARD3Q14849 445 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 TRIP4Q15650 581 aaPredicted RBP13.88□□□□□ -0.19
DDX54-202ENST00000314045 ERAP2Q6P179 960 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 EFL1Q7Z2Z2 1120 aaKnown RBP13.88□□□□□ -0.19
DDX54-202ENST00000314045 PRPF39Q86UA1 669 aaKnown RBP13.88□□□□□ -0.19
DDX54-202ENST00000314045 SMOQ99835 787 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 CRTAC1Q9NQ79 661 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 PIGVQ9NUD9 493 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 SYBUQ9NX95 663 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.88□□□□□ -0.19
DDX54-202ENST00000314045 BCORQ6W2J9 1755 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 TRPC5OSA6NMA1 111 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 MEIS3P2A8K0S8 358 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 SYCE1LA8MT33 242 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 IRAK2O43187 625 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 PCDH8O95206 1070 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 HTR7P34969 479 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 MAPK8P45983 427 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 CPA2P48052 419 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 SKOR1P84550 965 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 HIC1Q14526 733 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 CYP1B1Q16678 543 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 POTEHQ6S545 545 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 OTOP3Q7RTS5 596 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 SRLQ86TD4 932 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 ZDHHC6Q9H6R6 413 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 RIC8BQ9NVN3 520 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 PCDHGB4Q9UN71 923 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 FAM95CA0A1B0GW59 222 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 CCDC85CA6NKD9 419 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 CCL16O15467 120 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 LMNAP02545 664 aaKnown RBP13.88□□□□□ -0.19
DDX54-202ENST00000314045 ABL2P42684 1182 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 ZNF132P52740 706 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 FNDC3BQ53EP0 1204 aaKnown RBP13.88□□□□□ -0.19
DDX54-202ENST00000314045 OTOAQ7RTW8 1153 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 KIF2BQ8N4N8 673 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 GRIN3AQ8TCU5 1115 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 SUSD6Q92537 303 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 ZIC5Q96T25 663 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 MRPL1Q9BYD6 325 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms