RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 LINC01565O15544 149 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 PSMD3O43242 534 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 KDELR3O43731 214 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 BANF1O75531 89 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 GLP2RO95838 553 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 HLA-DQB2P05538 268 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 MMP13P45452 471 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 NUMBP49757 651 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 EIF3BP55884 814 aaKnown RBP22.97■■□□□ 1.27
IRF3-201ENST00000309877 SLC10A7Q0GE19 358 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 FASTKD3Q14CZ7 662 aaKnown RBP22.97■■□□□ 1.27
IRF3-201ENST00000309877 ZNF77Q15935 545 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 TMCO4Q5TGY1 634 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 GPR149Q86SP6 731 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 CAND1Q86VP6 1230 aaKnown RBP22.97■■□□□ 1.27
IRF3-201ENST00000309877 ANKMY2Q8IV38 441 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 MFN1Q8IWA4 741 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 GOLGA6L1Q8N7Z2 621 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 OR2W6PQ8NHA6 318 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 UHMK1Q8TAS1 419 aaKnown RBP22.97■■□□□ 1.27
IRF3-201ENST00000309877 ZNF599Q96NL3 588 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 PPP1R2P1Q96PQ5 205 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 FCRL5Q96RD9 977 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 NT5MQ9NPB1 228 aa22.97■■□□□ 1.27
IRF3-201ENST00000309877 NOTCH4Q99466 2003 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 SHROOM3Q8TF72 1996 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 OPA1O60313 960 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 AVILO75366 819 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 NUDT17P0C025 328 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 TCF3P15923 654 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 ITKQ08881 620 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 USP4Q13107 963 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 LBRQ14739 615 aaKnown RBP22.96■■□□□ 1.27
IRF3-201ENST00000309877 UBAP2Q5T6F2 1119 aaKnown RBP22.96■■□□□ 1.27
IRF3-201ENST00000309877 ANKRD54Q6NXT1 300 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 LEKR1Q6ZMV7 388 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 TEX26Q8N6G2 289 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 CELF5Q8N6W0 485 aaKnown RBP22.96■■□□□ 1.27
IRF3-201ENST00000309877 FBXO36Q8NEA4 188 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 RIN3Q8TB24 985 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 GORASP1Q9BQQ3 440 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 PRO3102Q9H379 93 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 KIF9Q9HAQ2 790 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 AAR2Q9Y312 384 aaKnown RBP22.96■■□□□ 1.27
IRF3-201ENST00000309877 NFS1Q9Y697 457 aa22.96■■□□□ 1.27
IRF3-201ENST00000309877 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.96■■□□□ 1.27
IRF3-201ENST00000309877 CACNG3O60359 315 aa22.95■■□□□ 1.26
IRF3-201ENST00000309877 ANXA9O76027 345 aa22.95■■□□□ 1.26
IRF3-201ENST00000309877 AP2A1O95782 977 aa22.95■■□□□ 1.26
IRF3-201ENST00000309877 HOXD9P28356 352 aaPredicted RBP22.95■■□□□ 1.26
IRF3-201ENST00000309877 IFNAR2P48551 515 aa22.95■■□□□ 1.26
IRF3-201ENST00000309877 SPARCL1Q14515 664 aa22.95■■□□□ 1.26
IRF3-201ENST00000309877 FSCBQ5H9T9 825 aa22.95■■□□□ 1.26
IRF3-201ENST00000309877 CEP85LQ5SZL2 805 aa22.95■■□□□ 1.26
IRF3-201ENST00000309877 POTEHQ6S545 545 aa22.95■■□□□ 1.26
IRF3-201ENST00000309877 ZNF419Q96HQ0 510 aaPredicted RBP22.95■■□□□ 1.26
IRF3-201ENST00000309877 ACE2Q9BYF1 805 aaPredicted RBP22.95■■□□□ 1.26
IRF3-201ENST00000309877 PLK2Q9NYY3 685 aa22.95■■□□□ 1.26
IRF3-201ENST00000309877 CBX4O00257 560 aa22.94■■□□□ 1.26
IRF3-201ENST00000309877 MLNP12872 115 aa22.94■■□□□ 1.26
IRF3-201ENST00000309877 WEE1P30291 646 aa22.94■■□□□ 1.26
IRF3-201ENST00000309877 GRIA1P42261 906 aa22.94■■□□□ 1.26
IRF3-201ENST00000309877 LRRC8BQ6P9F7 803 aa22.94■■□□□ 1.26
IRF3-201ENST00000309877 ZNF534Q76KX8 674 aa22.94■■□□□ 1.26
IRF3-201ENST00000309877 PALM2Q8IXS6 379 aa22.94■■□□□ 1.26
IRF3-201ENST00000309877 BBS5Q8N3I7 341 aa22.94■■□□□ 1.26
IRF3-201ENST00000309877 MLPHQ9BV36 600 aaPredicted RBP22.94■■□□□ 1.26
IRF3-201ENST00000309877 LRRC40Q9H9A6 602 aa22.94■■□□□ 1.26
IRF3-201ENST00000309877 VPS37BQ9H9H4 285 aa22.94■■□□□ 1.26
IRF3-201ENST00000309877 PDFQ9HBH1 243 aa22.94■■□□□ 1.26
IRF3-201ENST00000309877 HAUS2Q9NVX0 235 aa22.94■■□□□ 1.26
IRF3-201ENST00000309877 FAM53CQ9NYF3 392 aa22.94■■□□□ 1.26
IRF3-201ENST00000309877 UBP1Q9NZI7 540 aa22.94■■□□□ 1.26
IRF3-201ENST00000309877 UBA2Q9UBT2 640 aaPredicted RBP22.94■■□□□ 1.26
IRF3-201ENST00000309877 VPS28Q9UK41 221 aa22.94■■□□□ 1.26
IRF3-201ENST00000309877 SLC9A3R1O14745 358 aaPredicted RBP22.93■■□□□ 1.26
IRF3-201ENST00000309877 SUN1O94901 812 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 SHBGP04278 402 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 ELK3P41970 407 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 GEMP55040 296 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 CBLBQ13191 982 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 ZNF235Q14590 738 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 CCDC38Q502W7 563 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 SYCE2Q6PIF2 218 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 NPAS3Q8IXF0 933 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 SLC25A51Q9H1U9 297 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 MED4Q9NPJ6 270 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 LMCD1Q9NZU5 365 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 CHMP2BQ9UQN3 213 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 HELZP42694 1942 aaKnown RBP22.93■■□□□ 1.26
IRF3-201ENST00000309877 GOLGA6L10A6NI86 522 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 HOXB8P17481 243 aaPredicted RBP22.93■■□□□ 1.26
IRF3-201ENST00000309877 MZF1P28698 734 aaPredicted RBP22.93■■□□□ 1.26
IRF3-201ENST00000309877 CSKP41240 450 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 TNK2Q07912 1038 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 FYB2Q5VWT5 728 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 KCTD11Q693B1 232 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 GET4Q7L5D6 327 aaPredicted RBP22.93■■□□□ 1.26
IRF3-201ENST00000309877 ATP11CQ8NB49 1132 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 SPATA22Q8NHS9 363 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms