RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 FARP1Q9Y4F1 1045 aaPredicted RBP18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 DOCK4Q8N1I0 1966 aa18.28■□□□□ 0.52
SSSCA1-201ENST00000309328 ZDBF2Q9HCK1 2354 aa18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 PPP1R12AO14974 1030 aaPredicted RBP18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 PRAMEF11O60813 436 aa18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 IL12RB1P42701 662 aa18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 IL10RBQ08334 325 aa18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 GAS6Q14393 721 aa18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 BBS12Q6ZW61 710 aa18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 DSG4Q86SJ6 1040 aa18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 PLPP6Q8IY26 295 aa18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 BBS5Q8N3I7 341 aa18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 PCDH20Q8N6Y1 951 aaKnown RBP18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 PLD5Q8N7P1 536 aa18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 SORCS1Q8WY21 1168 aa18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 CELF6Q96J87 481 aaKnown RBP18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 PRMT8Q9NR22 394 aaPredicted RBP18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 ETNK2Q9NVF9 386 aa18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 UBA2Q9UBT2 640 aaPredicted RBP18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 IPO11Q9UI26 975 aaKnown RBP18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 HCN2Q9UL51 889 aa18.27■□□□□ 0.52
SSSCA1-201ENST00000309328 CCDC163A0A0D9SF12 145 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 APOC4-APOC2K7ER74 178 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 SGK1O00141 431 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 ALOX15BO15296 676 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 MFSD11O43934 449 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 SNAP91O60641 907 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 CST8O60676 142 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 ADAM23O75077 832 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 APBB3O95704 486 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 APOC2P02655 101 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 EPHX1P07099 455 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 HSPA9P38646 679 aaKnown RBP18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 GARSP41250 739 aaKnown RBP18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 RECQLP46063 649 aaPredicted RBP18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 NRLP54845 237 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 ARF5P84085 180 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 SFSWAPQ12872 951 aaKnown RBP18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 CAMK2GQ13555 558 aaPredicted RBP18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 ELAVL3Q14576 367 aaKnown RBP18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 ZNF569Q5MCW4 686 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 CCDC181Q5TID7 509 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 CCDC33Q8N5R6 958 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 TTC13Q8NBP0 860 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 TSTD1Q8NFU3 115 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 P3H4Q92791 437 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 HDAC11Q96DB2 347 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 MYO19Q96H55 970 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 TSGA13Q96PP4 275 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 FERMT1Q9BQL6 677 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 LRFN3Q9BTN0 628 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 KCNH6Q9H252 994 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 DTLQ9NZJ0 730 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 AMACRQ9UHK6 382 aa18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 PACSIN2Q9UNF0 486 aaPredicted RBP18.26■□□□□ 0.51
SSSCA1-201ENST00000309328 RNASEH1O60930 286 aaKnown RBP18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 C7P10643 843 aa18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 PYGMP11217 842 aa18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 SRCP12931 536 aa18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 CCNCP24863 283 aa18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 CTSOP43234 321 aaPredicted RBP18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 RENBPP51606 427 aa18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 DLG2Q15700 870 aa18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 ZNF528Q3MIS6 628 aa18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 ACCSLQ4AC99 568 aa18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 KAZNQ674X7 775 aa18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 MAIP1Q8WWC4 291 aa18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 RPL10LQ96L21 214 aaKnown RBP18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 ACOX2Q99424 681 aa18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 FRMD8P1Q9BZ68 369 aaPredicted RBP18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 IRF2BPLQ9H1B7 796 aa18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 PDFQ9HBH1 243 aa18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 EBF1Q9UH73 591 aa18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 SCML1Q9UN30 329 aa18.25■□□□□ 0.51
SSSCA1-201ENST00000309328 HACD1B0YJ81 288 aa18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 KCNK3O14649 394 aa18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 MTSS1O43312 755 aa18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 GALR2O43603 387 aaPredicted RBP18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 PRKCHP24723 683 aa18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 STK19P49842 368 aaPredicted RBP18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 ZBTB16Q05516 673 aa18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 XRCC4Q13426 336 aa18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 C22orf39Q6P5X5 142 aa18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 OR2T3Q8NH03 318 aa18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 FRS2Q8WU20 508 aa18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 HAUS1Q96CS2 278 aa18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 OLFM3Q96PB7 478 aa18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 TLR10Q9BXR5 811 aa18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 SEPT3Q9UH03 358 aa18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 SLCO3A1Q9UIG8 710 aa18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 HEY1Q9Y5J3 304 aa18.24■□□□□ 0.51
SSSCA1-201ENST00000309328 MIA3Q5JRA6 1907 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 A0A1W2PQF6 199 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 CES2O00748 559 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 MAFKO60675 156 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 GSRP00390 522 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 KRT10P13645 584 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 GLDCP23378 1020 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 MAPK8P45983 427 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 GNG11P61952 73 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms