RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 TRNP1Q6NT89 227 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 VSIG1Q86XK7 387 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 DNAAF5Q86Y56 855 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 MIB1Q86YT6 1006 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 TMEM139Q8IV31 216 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 OR52K2Q8NGK3 314 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 OSCP1Q8WVF1 389 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 TTC17Q96AE7 1141 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 PGAP3Q96FM1 320 aaPredicted RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 SERPINB11Q96P15 392 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 TRMT61BQ9BVS5 477 aaKnown RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 SLC2A4RGQ9NR83 387 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 PARVAQ9NVD7 372 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 SMPD4Q9NXE4 827 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.47□□□□□ -1.05
CHD6-201ENST00000309279 EIF2B4Q9UI10 523 aaKnown RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 TRHDEQ9UKU6 1024 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 SORCS3Q9UPU3 1222 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 MAPRE3Q9UPY8 281 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 TLR6Q9Y2C9 796 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 MYOFQ9NZM1 2061 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 F5P12259 2224 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 SLC12A8A0AV02 714 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 ESPNB1AK53 854 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 EIF3FO00303 357 aaPredicted RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 ZNF263O14978 683 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 ENDOD1O94919 500 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 TRUB2O95900 331 aaKnown RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 KLKB1P03952 638 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 SRFP11831 508 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 POLD2P49005 469 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 GALCP54803 685 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 RNASE9P60153 205 aaKnown RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 RPL7AP62424 266 aaKnown RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 GPC5P78333 572 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 PITX1P78337 314 aaPredicted RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 IRX1P78414 480 aaPredicted RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 ADCY2Q08462 1091 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 SCARB2Q14108 478 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 PPA1Q15181 289 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 OTUD1Q5VV17 481 aaPredicted RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 BRICD5Q6PL45 260 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 Q6ZNB5 142 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 PHLDB2Q86SQ0 1253 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 TAC4Q86UU9 113 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 ADGRG2Q8IZP9 1017 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 TPCN2Q8NHX9 752 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 JOSD2Q8TAC2 188 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 CENPIQ92674 756 aaPredicted RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 IRF7Q92985 503 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 WBP2Q969T9 261 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 AZIN2Q96A70 460 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 PLD4Q96BZ4 506 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 OTUB2Q96DC9 234 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 CHFRQ96EP1 664 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 PDLIM2Q96JY6 352 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 ADAM33Q9BZ11 813 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 THAP2Q9H0W7 228 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 MRPL47Q9HD33 250 aaKnown RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 OSGEPQ9NPF4 335 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 SPTLC3Q9NUV7 552 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 THG1LQ9NWX6 298 aaKnown RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 CALCOCO1Q9P1Z2 691 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 CFAP97Q9P2B7 532 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 ZNF624Q9P2J8 865 aaPredicted RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 TBC1D14Q9P2M4 693 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 CNOT8Q9UFF9 292 aaKnown RBP8.47□□□□□ -1.05
CHD6-201ENST00000309279 RASAL2Q9UJF2 1139 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 STOML2Q9UJZ1 356 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 STAP1Q9ULZ2 295 aa8.47□□□□□ -1.05
CHD6-201ENST00000309279 ARPC4-TTLL3A0A0A6YYG9 625 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 TMEM191CA6NGB0 347 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 EIF3CLB5ME19 914 aaKnown RBP8.46□□□□□ -1.06
CHD6-201ENST00000309279 H0Y626 953 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 SLC9A3R1O14745 358 aaPredicted RBP8.46□□□□□ -1.06
CHD6-201ENST00000309279 POLR3GO15318 223 aaPredicted RBP8.46□□□□□ -1.06
CHD6-201ENST00000309279 IRAK2O43187 625 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 MSI1O43347 362 aaKnown RBP8.46□□□□□ -1.06
CHD6-201ENST00000309279 NDUFA10O95299 355 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 GJB6O95452 261 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 LATS1O95835 1130 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 F9P00740 461 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 PDGFRAP16234 1089 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 ABCB4P21439 1286 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 GDI1P31150 447 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 HADHAP40939 763 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 PTPN9P43378 593 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 ASMTP46597 345 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 ZNF143P52747 638 aaPredicted RBP8.46□□□□□ -1.06
CHD6-201ENST00000309279 MLLT6P55198 1093 aaPredicted RBP8.46□□□□□ -1.06
CHD6-201ENST00000309279 GRM2Q14416 872 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 PDGFRLQ15198 375 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 PPP1R7Q15435 360 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 EML3Q32P44 896 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 CCDC14Q49A88 953 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 LIN54Q6MZP7 749 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 DNAJC24Q6P3W2 148 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 UNC45BQ8IWX7 931 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 FAM217AQ8IXS0 508 aa8.46□□□□□ -1.06
CHD6-201ENST00000309279 UBALD2Q8IYN6 164 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms