RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 DYNC1I2Q13409 638 aaKnown RBP16.88■□□□□ 0.29
SSH3-201ENST00000308127 ART3Q13508 389 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 GRM2Q14416 872 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 MYLK3Q32MK0 819 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 CCDC153Q494R4 210 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 PITRM1Q5JRX3 1037 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 STXBP5Q5T5C0 1151 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 C9orf57Q5W0N0 161 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 KLHDC10Q6PID8 442 aa16.88■□□□□ 0.29
SSH3-201ENST00000308127 APOBEC3FQ8IUX4 373 aaKnown RBP16.88■□□□□ 0.29
SSH3-201ENST00000308127 ZNF512Q96ME7 567 aaPredicted RBP16.88■□□□□ 0.29
SSH3-201ENST00000308127 KCNU1A8MYU2 1149 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 MATN2O00339 956 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 CYP2C8P10632 490 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 SOX11P35716 441 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 R3HDM1Q15032 1099 aaKnown RBP16.87■□□□□ 0.29
SSH3-201ENST00000308127 ZNF423Q2M1K9 1284 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 C4orf22Q6V702 233 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 OSTM1Q86WC4 334 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 HAPLN3Q96S86 360 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 MED10Q9BTT4 135 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 OXSMQ9NWU1 459 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 GTSE1Q9NYZ3 720 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 XPR1Q9UBH6 696 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 TBC1D30Q9Y2I9 924 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 COMMD3-BMI1R4GMX3 469 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 RNASEH2AO75792 299 aaKnown RBP16.87■□□□□ 0.29
SSH3-201ENST00000308127 MT-CYBP00156 380 aaPredicted RBP16.87■□□□□ 0.29
SSH3-201ENST00000308127 RPL14P50914 215 aaKnown RBP16.87■□□□□ 0.29
SSH3-201ENST00000308127 USP46P62068 366 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 SLC25A52Q3SY17 297 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 SPANXN3Q5MJ09 141 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 IL23RQ5VWK5 629 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 ARHGAP36Q6ZRI8 547 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 ARMCX2Q7L311 632 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 FSTL5Q8N475 847 aaPredicted RBP16.87■□□□□ 0.29
SSH3-201ENST00000308127 ZFP28Q8NHY6 868 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 RHOBTB2Q9BYZ6 727 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 PREBQ9HCU5 417 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 TLK1Q9UKI8 766 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 CSADQ9Y600 493 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 RGSL1A5PLK6 1076 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 C9IYK1 514 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 XPO1O14980 1071 aaKnown RBP16.87■□□□□ 0.29
SSH3-201ENST00000308127 HDAC3O15379 428 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 ATP5BP06576 529 aaKnown RBP16.87■□□□□ 0.29
SSH3-201ENST00000308127 THRAP10827 490 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 GABRB3P28472 473 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 EPHX2P34913 555 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 GJA9P57773 515 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 DGKDQ16760 1214 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 INSCQ1MX18 579 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 LRRC23Q53EV4 343 aaPredicted RBP16.87■□□□□ 0.29
SSH3-201ENST00000308127 FBXO47Q5MNV8 452 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 PSTKQ8IV42 348 aaKnown RBP16.87■□□□□ 0.29
SSH3-201ENST00000308127 CEP97Q8IW35 865 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 NCSTNQ92542 709 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 NXNL1Q96CM4 212 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 PRICKLE1Q96MT3 831 aaPredicted RBP16.87■□□□□ 0.29
SSH3-201ENST00000308127 SLC39A3Q9BRY0 314 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 VPS33BQ9H267 617 aa16.87■□□□□ 0.29
SSH3-201ENST00000308127 MTF2Q9Y483 593 aaPredicted RBP16.87■□□□□ 0.29
SSH3-201ENST00000308127 KPNA7A9QM74 516 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 C9JVG2 144 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 NME5P56597 212 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 SH3D19Q5HYK7 790 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 RARS2Q5T160 578 aaKnown RBP16.86■□□□□ 0.29
SSH3-201ENST00000308127 MAP3K21Q5TCX8 1036 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 NT5DC4Q86YG4 428 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 EXOC8Q8IYI6 725 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 SLC2A6Q9UGQ3 507 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 RIMS3Q9UJD0 308 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 YJEFN3A6XGL0 299 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 H3BRB1 525 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 H3BSA7 217 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 CASQ2O14958 399 aaPredicted RBP16.86■□□□□ 0.29
SSH3-201ENST00000308127 AURKAO14965 403 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 TPI1P60174 286 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 POU5F1BQ06416 359 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 ADGRE1Q14246 886 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 PPP1R3AQ16821 1122 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 FAM187BQ17R55 369 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 PIGGQ5H8A4 983 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 CYS1Q717R9 158 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 GPRIN1Q7Z2K8 1008 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 LSMEM2Q8N112 164 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 TMIGD2Q96BF3 282 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 SLC45A3Q96JT2 553 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 MRPL1Q9BYD6 325 aaKnown RBP16.86■□□□□ 0.29
SSH3-201ENST00000308127 TUT1Q9H6E5 874 aaKnown RBP16.86■□□□□ 0.29
SSH3-201ENST00000308127 LRRC4Q9HBW1 653 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 TNFRSF12AQ9NP84 129 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 RHBDL2Q9NX52 303 aa16.86■□□□□ 0.29
SSH3-201ENST00000308127 COPG1Q9Y678 874 aaKnown RBP16.86■□□□□ 0.29
SSH3-201ENST00000308127 HACD1B0YJ81 288 aa16.85■□□□□ 0.29
SSH3-201ENST00000308127 VAPBO95292 243 aa16.85■□□□□ 0.29
SSH3-201ENST00000308127 AP2A1O95782 977 aa16.85■□□□□ 0.29
SSH3-201ENST00000308127 SETSIPP0DME0 302 aa16.85■□□□□ 0.29
SSH3-201ENST00000308127 MYL4P12829 197 aa16.85■□□□□ 0.29
SSH3-201ENST00000308127 GRM5P41594 1212 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms