RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 PLEKHG4BQ96PX9 1271 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 MAN2B2Q9Y2E5 1009 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 H3BNH8 94 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 CYP7B1O75881 506 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 LIPMQ5VYY2 423 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 SLC27A1Q6PCB7 646 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 BRINP3Q76B58 766 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 RAVER1Q8IY67 606 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 PJA1Q8NG27 643 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 FUBP3Q96I24 572 aaKnown RBP eCLIP4.07□□□□□ -1.76
USH2A-201ENST00000307340 LRIG1Q96JA1 1093 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 GIN1Q9NXP7 522 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 PTTG2Q9NZH5 202 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ERGIC3Q9Y282 383 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 CXorf51AA0A1B0GTR3 108 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 GPR89AB7ZAQ6 455 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 GPR89BP0CG08 455 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 CAP2P40123 477 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 NDST2P52849 883 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 CDH18Q13634 790 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 HERC3Q15034 1050 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 PCID2Q5JVF3 399 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 SFR1Q86XK3 245 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 PIGBQ92521 554 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ERP27Q96DN0 273 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ITPKCQ96DU7 683 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 MRRFQ96E11 262 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 WDR81Q562E7 1941 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 SPATA31A5Q5VU36 1347 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 SPATA31A7Q8IWB4 1347 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 F5H5T6 163 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 NDUFS2O75306 463 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 NDUFS1P28331 727 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ZNF284Q2VY69 593 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 BROXQ5VW32 411 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 UNC5DQ6UXZ4 953 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 C3P1Q6ZMU1 363 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 MTMR14Q8NCE2 650 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 NKD2Q969F2 451 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 CREB3L1Q96BA8 519 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 KCTD15Q96SI1 283 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 PSMB7Q99436 277 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 FAM213AQ9BRX8 229 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 FAIM2Q9BWQ8 316 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 TASP1Q9H6P5 420 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 IARS2Q9NSE4 1012 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 ZFP57Q9NU63 452 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ING4Q9UNL4 249 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 BLACEA4D250 179 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 LYPLA1O75608 230 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 GH2P01242 217 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ARHGDIBP52566 201 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 TCP10Q12799 353 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 USP10Q14694 798 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 PCDHB16Q9NRJ7 776 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 DKK3Q9UBP4 350 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 BCLAF3A2AJT9 711 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 LOC110117498-PIK3R3F6TDL0 507 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 LRIG2O94898 1065 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 CD63P08962 238 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 GMPSP49915 693 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 C2CD6Q53TS8 623 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 PDE12Q6L8Q7 609 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 BORAQ6PGQ7 559 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ADGRD2Q7Z7M1 963 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 C8orf59Q8N0T1 100 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 CARNMT1Q8N4J0 409 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 OR7A2PQ8NGA2 310 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 C9orf43Q8TAL5 461 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 PIK3R3Q92569 461 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 PAPSS2O95340 614 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 A1BGP04217 495 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ENO1P06733 434 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 HSD17B12Q53GQ0 312 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 UNQ6126/PRO20091Q6UXV3 157 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ZNF467Q7Z7K2 595 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 GALNT7Q86SF2 657 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 LHFPL3Q86UP9 236 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 GLT1D1Q96MS3 346 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 POLR3FQ9H1D9 316 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 C3orf14Q9HBI5 128 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 GPN1Q9HCN4 374 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 ADARB2Q9NS39 739 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 SUCOQ9UBS9 1254 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.07□□□□□ -1.76
USH2A-201ENST00000307340 KLHL20Q9Y2M5 609 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 PCDHGB2Q9Y5G2 931 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 FOCADQ5VW36 1801 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 UBDO15205 165 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ZBTB14O43829 449 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 PLEKHA8P1O95397 391 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ADCY1Q08828 1119 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 CHRNA2Q15822 529 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ARMC4Q5T2S8 1044 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 MSANTD1Q6ZTZ1 278 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 RBM15BQ8NDT2 890 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 SMYD2Q9NRG4 433 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 SAE1Q9UBE0 346 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 PLA2G4CQ9UP65 541 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 AGAP1Q9UPQ3 857 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms