RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 GRM2Q14416 872 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 PHKG1Q16816 387 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 SGO1Q5FBB7 561 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 FSCBQ5H9T9 825 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 ADGRF1Q5T601 910 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 LINGO4Q6UY18 593 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 PRR23BQ6ZRT6 265 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 TAS1R3Q7RTX0 852 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 C11orf74Q86VG3 221 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 HOMEZQ8IX15 550 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 STK40Q8N2I9 435 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 FNIP1Q8TF40 1166 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 CXorf40BQ96DE9 158 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 LGMNQ99538 433 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 HERC2P3Q9BVR0 1158 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 GPAMQ9HCL2 828 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 RCOR3Q9P2K3 495 aaPredicted RBP9.41□□□□□ -0.9
PTPRE-202ENST00000306042 WNT6Q9Y6F9 365 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 TRIM49D1C9J1S8 452 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 CTPS1P17812 591 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 CYP2A7P20853 494 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 TIE1P35590 1138 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 DDX39BQ13838 428 aaKnown RBP9.41□□□□□ -0.9
PTPRE-202ENST00000306042 DAB2IPQ5VWQ8 1189 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 PAPD7Q5XG87 772 aaKnown RBP9.41□□□□□ -0.9
PTPRE-202ENST00000306042 ZNF470Q6ECI4 717 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 SERAC1Q96JX3 654 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 PPP1R10Q96QC0 940 aaKnown RBP9.41□□□□□ -0.9
PTPRE-202ENST00000306042 GIMAP4Q9NUV9 329 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 MIOSQ9NXC5 875 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 APPL1Q9UKG1 709 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 SMG5Q9UPR3 1016 aaKnown RBP9.41□□□□□ -0.9
PTPRE-202ENST00000306042 TLR6Q9Y2C9 796 aa9.41□□□□□ -0.9
PTPRE-202ENST00000306042 A0A1W2PQ67 120 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 IRAK2O43187 625 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 AP5Z1O43299 807 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 ALADP13716 330 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 L1CAMP32004 1257 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 PTPN7P35236 360 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 CD151P48509 253 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 VSNL1P62760 191 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 WASHC5Q12768 1159 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 USP4Q13107 963 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 BBS12Q6ZW61 710 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 MRPL10Q7Z7H8 261 aaKnown RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 C4orf33Q8N1A6 199 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 OR7D4Q8NG98 312 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 HMGB4Q8WW32 186 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 MYO19Q96H55 970 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 EVLQ9UI08 416 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 BACE2Q9Y5Z0 518 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 NCF1BA6NI72 391 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 NCF1CA8MVU1 366 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 LRIG2O94898 1065 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 PABPC1P11940 636 aaKnown RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 NCF1P14598 390 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 HNRNPH3P31942 346 aaKnown RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 DAB2P98082 770 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 SOX4Q06945 474 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 ILF2Q12905 390 aaKnown RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 ITPRIPL2Q3MIP1 535 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 CYB5D1Q6P9G0 228 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 MON1BQ7L1V2 547 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 SDCCAG3Q96C92 435 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 KLF6Q99612 283 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 C10orf88Q9H8K7 445 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 NMRK1Q9NWW6 199 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 TAS2R13Q9NYV9 303 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 PPARGC1AQ9UBK2 798 aaKnown RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 SIX4Q9UIU6 781 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 SCML2Q9UQR0 700 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 SYCE1LA8MT33 242 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 GRXCR1A8MXD5 290 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 H3BQ06 376 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 FSBPO95073 299 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 POP4O95707 220 aaKnown RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 GPD2P43304 727 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 TAF5Q15542 800 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 SPDYE7PQ495Y7 208 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 CLLU1OSQ5K130 101 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 RTP2Q5QGT7 225 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 KCNMB4Q86W47 210 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 CIR1Q86X95 450 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 ARID3BQ8IVW6 561 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 RPL10LQ96L21 214 aaKnown RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 CSPG4P5Q96PW8 444 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 KXD1Q9BQD3 176 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 C17orf80Q9BSJ5 609 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 TNKS2Q9H2K2 1166 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 PHPT1Q9NRX4 125 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-202ENST00000306042 PCDHGC5Q9Y5F6 944 aa9.4□□□□□ -0.9
PTPRE-202ENST00000306042 LY75O60449 1722 aa9.4□□□□□ -0.91
PTPRE-202ENST00000306042 MEIS3P2A8K0S8 358 aa9.4□□□□□ -0.91
PTPRE-202ENST00000306042 CFLARO15519 480 aa9.4□□□□□ -0.91
PTPRE-202ENST00000306042 BUD23O43709 281 aaKnown RBP9.4□□□□□ -0.91
PTPRE-202ENST00000306042 NBNO60934 754 aa9.4□□□□□ -0.91
PTPRE-202ENST00000306042 EPB42P16452 691 aa9.4□□□□□ -0.91
PTPRE-202ENST00000306042 SERPINB8P50452 374 aa9.4□□□□□ -0.91
PTPRE-202ENST00000306042 DPYSL3Q14195 570 aa9.4□□□□□ -0.91
PTPRE-202ENST00000306042 PDPK2PQ6A1A2 396 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms