RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 NAPEPLDQ6IQ20 393 aa6.67□□□□□ -1.34
USP47-201ENST00000305481 CIR1Q86X95 450 aaPredicted RBP6.67□□□□□ -1.34
USP47-201ENST00000305481 ARMC2Q8NEN0 867 aa6.67□□□□□ -1.34
USP47-201ENST00000305481 C2orf15Q8WU43 125 aaKnown RBP6.67□□□□□ -1.34
USP47-201ENST00000305481 C10orf82Q8WW14 230 aa6.67□□□□□ -1.34
USP47-201ENST00000305481 CDKL2Q92772 493 aa6.67□□□□□ -1.34
USP47-201ENST00000305481 IGSF21Q96ID5 467 aa6.67□□□□□ -1.34
USP47-201ENST00000305481 KIFC1Q9BW19 673 aa6.67□□□□□ -1.34
USP47-201ENST00000305481 IL22Q9GZX6 179 aa6.67□□□□□ -1.34
USP47-201ENST00000305481 CRISPLD2Q9H0B8 497 aa6.67□□□□□ -1.34
USP47-201ENST00000305481 OLA1Q9NTK5 396 aaKnown RBP6.67□□□□□ -1.34
USP47-201ENST00000305481 ZFATQ9P243 1243 aa6.67□□□□□ -1.34
USP47-201ENST00000305481 MTRRQ9UBK8 725 aa6.67□□□□□ -1.34
USP47-201ENST00000305481 SOX13Q9UN79 622 aa6.67□□□□□ -1.34
USP47-201ENST00000305481 AAR2Q9Y312 384 aaKnown RBP6.67□□□□□ -1.34
USP47-201ENST00000305481 MAGEB16A2A368 324 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 CCDC78A2IDD5 438 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 C2CD2LO14523 706 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 HGSO14964 777 aaPredicted RBP6.66□□□□□ -1.34
USP47-201ENST00000305481 NDST2P52849 883 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 RING1Q06587 406 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 NAB1Q13506 487 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 PRPSAP1Q14558 356 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 USP41Q3LFD5 358 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 HSP90AA5PQ58FG0 334 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 ATP6V0D2Q8N8Y2 350 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 ACVR1CQ8NER5 493 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 IPMKQ8NFU5 416 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 RFWD2Q8NHY2 731 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 MRGPRX2Q96LB1 330 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 TOX2Q96NM4 488 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 CLSTN3Q9BQT9 956 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 UBE2OQ9C0C9 1292 aaKnown RBP6.66□□□□□ -1.34
USP47-201ENST00000305481 RASSF4Q9H2L5 321 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 ACTR5Q9H9F9 607 aaPredicted RBP6.66□□□□□ -1.34
USP47-201ENST00000305481 RXFP1Q9HBX9 757 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 HAUS2Q9NVX0 235 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 COMMD8Q9NX08 183 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 FNIP2Q9P278 1114 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 KLHL14Q9P2G3 628 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 TBX21Q9UL17 535 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 GOLGA8TH3BQL2 631 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 ANXA9O76027 345 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 HMGA1P17096 107 aaKnown RBP6.66□□□□□ -1.34
USP47-201ENST00000305481 ITGB8P26012 769 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 GP5P40197 560 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 CHRNA4P43681 627 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 RPL10AP62906 217 aaKnown RBP6.66□□□□□ -1.34
USP47-201ENST00000305481 SLC10A7Q0GE19 358 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 BNIP1Q12981 228 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 TIGD7Q6NT04 549 aaPredicted RBP6.66□□□□□ -1.34
USP47-201ENST00000305481 C16orf46Q6P387 395 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 RANBP10Q6VN20 620 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 KDELC2Q7Z4H8 507 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 LRRC49Q8IUZ0 686 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 PSMG2Q969U7 264 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 KLHL5Q96PQ7 755 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 CPNE1Q99829 537 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 TBL1YQ9BQ87 522 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 FICDQ9BVA6 458 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 OXCT2Q9BYC2 517 aaPredicted RBP6.66□□□□□ -1.34
USP47-201ENST00000305481 ZNF395Q9H8N7 513 aaPredicted RBP6.66□□□□□ -1.34
USP47-201ENST00000305481 NPHS2Q9NP85 383 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 SIRPGQ9P1W8 387 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 CHKBQ9Y259 395 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 BACE2Q9Y5Z0 518 aa6.66□□□□□ -1.34
USP47-201ENST00000305481 KLF11O14901 512 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 PSMD3O43242 534 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 PMPCBO75439 489 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 GJB5O95377 273 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 MMP2P08253 660 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 SLC6A4P31645 630 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 MAGEA12P43365 314 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 ABCG1P45844 678 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 HNRNPDQ14103 355 aaKnown RBP6.65□□□□□ -1.34
USP47-201ENST00000305481 IKBKEQ14164 716 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 FBXW10Q5XX13 1052 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 FSTL4Q6MZW2 842 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 KDELC1Q6UW63 502 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 STRA8Q7Z7C7 330 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 LINC00523Q86TU6 105 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 PACS2Q86VP3 889 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 PGBD5Q8N414 524 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 FATE1Q969F0 183 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 ISL2Q96A47 359 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 RBBP8Q99708 897 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 TSSK1BQ9BXA7 367 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 C20orf27Q9GZN8 174 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 IQCGQ9H095 443 aaKnown RBP6.65□□□□□ -1.34
USP47-201ENST00000305481 ATXN3LQ9H3M9 355 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 KCNK13Q9HB14 408 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 MYLKQ15746 1914 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 TTC24A2A3L6 582 aaPredicted RBP6.65□□□□□ -1.34
USP47-201ENST00000305481 ZNF840PA6NDX5 716 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 ABLIM3O94929 683 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 PARNO95453 639 aaKnown RBP6.65□□□□□ -1.34
USP47-201ENST00000305481 GSTA1P08263 222 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 ARNTP27540 789 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 GABRB3P28472 473 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 NUMBP49757 651 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms