RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 CCDC181Q5TID7 509 aa24.99■■□□□ 1.59
HOXC9-201ENST00000303450 SYT13Q7L8C5 426 aa24.99■■□□□ 1.59
HOXC9-201ENST00000303450 SH2D3CQ8N5H7 860 aa24.99■■□□□ 1.59
HOXC9-201ENST00000303450 ATPAF2Q8N5M1 289 aa24.99■■□□□ 1.59
HOXC9-201ENST00000303450 MYO19Q96H55 970 aa24.99■■□□□ 1.59
HOXC9-201ENST00000303450 GABRG3Q99928 467 aa24.99■■□□□ 1.59
HOXC9-201ENST00000303450 TMEM245Q9H330 911 aa24.99■■□□□ 1.59
HOXC9-201ENST00000303450 SP110Q9HB58 689 aa24.99■■□□□ 1.59
HOXC9-201ENST00000303450 DTLQ9NZJ0 730 aa24.99■■□□□ 1.59
HOXC9-201ENST00000303450 IPO11Q9UI26 975 aaKnown RBP24.99■■□□□ 1.59
HOXC9-201ENST00000303450 NYNRINQ9P2P1 1898 aaKnown RBP24.99■■□□□ 1.59
HOXC9-201ENST00000303450 CXorf51AA0A1B0GTR3 108 aa24.98■■□□□ 1.59
HOXC9-201ENST00000303450 EPHX1P07099 455 aa24.98■■□□□ 1.59
HOXC9-201ENST00000303450 HLA-EP13747 358 aa24.98■■□□□ 1.59
HOXC9-201ENST00000303450 HOXB2P14652 356 aa24.98■■□□□ 1.59
HOXC9-201ENST00000303450 MX2P20592 715 aa24.98■■□□□ 1.59
HOXC9-201ENST00000303450 TGM2P21980 687 aa24.98■■□□□ 1.59
HOXC9-201ENST00000303450 PRKCHP24723 683 aa24.98■■□□□ 1.59
HOXC9-201ENST00000303450 GALNT2Q10471 571 aa24.98■■□□□ 1.59
HOXC9-201ENST00000303450 LEKR1Q6ZMV7 388 aa24.98■■□□□ 1.59
HOXC9-201ENST00000303450 ARHGAP36Q6ZRI8 547 aa24.98■■□□□ 1.59
HOXC9-201ENST00000303450 BBS12Q6ZW61 710 aa24.98■■□□□ 1.59
HOXC9-201ENST00000303450 LRRC49Q8IUZ0 686 aa24.98■■□□□ 1.59
HOXC9-201ENST00000303450 ZNF366Q8N895 744 aa24.98■■□□□ 1.59
HOXC9-201ENST00000303450 CARD9Q9H257 536 aa24.98■■□□□ 1.59
HOXC9-201ENST00000303450 ZKSCAN5Q9Y2L8 839 aa24.98■■□□□ 1.59
HOXC9-201ENST00000303450 MUC22E2RYF6 1773 aaPredicted RBP24.98■■□□□ 1.59
HOXC9-201ENST00000303450 TTC34A8MYJ7 566 aa24.97■■□□□ 1.59
HOXC9-201ENST00000303450 J3KR12 359 aa24.97■■□□□ 1.59
HOXC9-201ENST00000303450 PRAMEF11O60813 436 aa24.97■■□□□ 1.59
HOXC9-201ENST00000303450 TJP3O95049 919 aa24.97■■□□□ 1.59
HOXC9-201ENST00000303450 SRCP12931 536 aa24.97■■□□□ 1.59
HOXC9-201ENST00000303450 NR2C2P49116 596 aa24.97■■□□□ 1.59
HOXC9-201ENST00000303450 SERPINH1P50454 418 aaKnown RBP24.97■■□□□ 1.59
HOXC9-201ENST00000303450 CLCN6P51797 869 aa24.97■■□□□ 1.59
HOXC9-201ENST00000303450 SLC10A2Q12908 348 aaPredicted RBP24.97■■□□□ 1.59
HOXC9-201ENST00000303450 STARD3Q14849 445 aa24.97■■□□□ 1.59
HOXC9-201ENST00000303450 NPNTQ6UXI9 565 aa24.97■■□□□ 1.59
HOXC9-201ENST00000303450 POLR3BQ9NW08 1133 aaPredicted RBP24.97■■□□□ 1.59
HOXC9-201ENST00000303450 SUN2Q9UH99 717 aa24.97■■□□□ 1.59
HOXC9-201ENST00000303450 RAD54BQ9Y620 910 aa24.97■■□□□ 1.59
HOXC9-201ENST00000303450 K7ERQ8 282 aa24.96■■□□□ 1.59
HOXC9-201ENST00000303450 ATP9BO43861 1147 aa24.96■■□□□ 1.59
HOXC9-201ENST00000303450 SYNCRIPO60506 623 aaKnown RBP24.96■■□□□ 1.59
HOXC9-201ENST00000303450 GARSP41250 739 aaKnown RBP24.96■■□□□ 1.59
HOXC9-201ENST00000303450 CXCL12P48061 93 aa24.96■■□□□ 1.59
HOXC9-201ENST00000303450 CCR3P51677 355 aa24.96■■□□□ 1.59
HOXC9-201ENST00000303450 IL10RBQ08334 325 aa24.96■■□□□ 1.59
HOXC9-201ENST00000303450 DLG2Q15700 870 aa24.96■■□□□ 1.59
HOXC9-201ENST00000303450 BZW1Q7L1Q6 419 aaKnown RBP24.96■■□□□ 1.59
HOXC9-201ENST00000303450 DTWD2Q8NBA8 298 aa24.96■■□□□ 1.59
HOXC9-201ENST00000303450 P3H4Q92791 437 aa24.96■■□□□ 1.59
HOXC9-201ENST00000303450 HERPUD2Q9BSE4 406 aa24.96■■□□□ 1.59
HOXC9-201ENST00000303450 C2orf42Q9NWW7 574 aa24.96■■□□□ 1.59
HOXC9-201ENST00000303450 UBA2Q9UBT2 640 aaPredicted RBP24.96■■□□□ 1.59
HOXC9-201ENST00000303450 ACTL7AQ9Y615 435 aa24.96■■□□□ 1.59
HOXC9-201ENST00000303450 SMAD6O43541 496 aaKnown RBP24.96■■□□□ 1.59
HOXC9-201ENST00000303450 CRY1Q16526 586 aa24.96■■□□□ 1.59
HOXC9-201ENST00000303450 HNRNPA1L2Q32P51 320 aaKnown RBP24.96■■□□□ 1.59
HOXC9-201ENST00000303450 MAMSTRQ6ZN01 415 aa24.96■■□□□ 1.59
HOXC9-201ENST00000303450 METTL3Q86U44 580 aaKnown RBP24.96■■□□□ 1.59
HOXC9-201ENST00000303450 CCNYQ8ND76 341 aa24.96■■□□□ 1.59
HOXC9-201ENST00000303450 HAUS1Q96CS2 278 aa24.96■■□□□ 1.59
HOXC9-201ENST00000303450 PDFQ9HBH1 243 aa24.96■■□□□ 1.59
HOXC9-201ENST00000303450 SAE1Q9UBE0 346 aaPredicted RBP24.96■■□□□ 1.59
HOXC9-201ENST00000303450 EDDM13A0A1B0GTR0 161 aa24.95■■□□□ 1.58
HOXC9-201ENST00000303450 APOC4-APOC2K7ER74 178 aa24.95■■□□□ 1.58
HOXC9-201ENST00000303450 MAFKO60675 156 aa24.95■■□□□ 1.58
HOXC9-201ENST00000303450 CD160O95971 181 aa24.95■■□□□ 1.58
HOXC9-201ENST00000303450 APOC2P02655 101 aa24.95■■□□□ 1.58
HOXC9-201ENST00000303450 ATP1A1P05023 1023 aaKnown RBP24.95■■□□□ 1.58
HOXC9-201ENST00000303450 DGKEP52429 567 aa24.95■■□□□ 1.58
HOXC9-201ENST00000303450 PDK1Q15118 436 aa24.95■■□□□ 1.58
HOXC9-201ENST00000303450 INO80DQ53TQ3 878 aaPredicted RBP24.95■■□□□ 1.58
HOXC9-201ENST00000303450 TMEM92Q6UXU6 159 aa24.95■■□□□ 1.58
HOXC9-201ENST00000303450 CASKIN2Q8WXE0 1202 aa24.95■■□□□ 1.58
HOXC9-201ENST00000303450 ERLEC1Q96DZ1 483 aa24.95■■□□□ 1.58
HOXC9-201ENST00000303450 POLMQ9NP87 494 aaPredicted RBP24.95■■□□□ 1.58
HOXC9-201ENST00000303450 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.95■■□□□ 1.58
HOXC9-201ENST00000303450 FCF1Q9Y324 198 aaKnown RBP24.95■■□□□ 1.58
HOXC9-201ENST00000303450 SHROOM3Q8TF72 1996 aa24.95■■□□□ 1.58
HOXC9-201ENST00000303450 A0A1W2PQF6 199 aa24.94■■□□□ 1.58
HOXC9-201ENST00000303450 PPP1R12AO14974 1030 aaPredicted RBP24.94■■□□□ 1.58
HOXC9-201ENST00000303450 PECAM1P16284 738 aaPredicted RBP24.94■■□□□ 1.58
HOXC9-201ENST00000303450 CXCR5P32302 372 aa24.94■■□□□ 1.58
HOXC9-201ENST00000303450 SATB1Q01826 763 aa24.94■■□□□ 1.58
HOXC9-201ENST00000303450 C1orf210Q8IVY1 113 aa24.94■■□□□ 1.58
HOXC9-201ENST00000303450 FRS2Q8WU20 508 aa24.94■■□□□ 1.58
HOXC9-201ENST00000303450 NSMCE1Q8WV22 266 aa24.94■■□□□ 1.58
HOXC9-201ENST00000303450 WDR24Q96S15 920 aa24.94■■□□□ 1.58
HOXC9-201ENST00000303450 LRFN3Q9BTN0 628 aa24.94■■□□□ 1.58
HOXC9-201ENST00000303450 CEP44Q9C0F1 390 aa24.94■■□□□ 1.58
HOXC9-201ENST00000303450 MTG2Q9H4K7 406 aa24.94■■□□□ 1.58
HOXC9-201ENST00000303450 CACNA1IQ9P0X4 2223 aa24.94■■□□□ 1.58
HOXC9-201ENST00000303450 LAMTOR5O43504 91 aa24.93■■□□□ 1.58
HOXC9-201ENST00000303450 TIGD7Q6NT04 549 aaPredicted RBP24.93■■□□□ 1.58
HOXC9-201ENST00000303450 KIAA1211LQ6NV74 962 aa24.93■■□□□ 1.58
HOXC9-201ENST00000303450 C22orf39Q6P5X5 142 aa24.93■■□□□ 1.58
HOXC9-201ENST00000303450 HDAC11Q96DB2 347 aa24.93■■□□□ 1.58
HOXC9-201ENST00000303450 ZNF599Q96NL3 588 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms