RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 TPD52L3Q96J77 140 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 SERPINB11Q96P15 392 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 CLCC1Q96S66 551 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 PTGES3LE9PB15 166 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 HIST1H2ABP04908 130 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 ICAM1P05362 532 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 DGKAP23743 735 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 GLRBP48167 497 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 SMAD1Q15797 465 aaKnown RBP11.45□□□□□ -0.58
GCN1-201ENST00000300648 EFCAB12Q6NXP0 572 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 HIST3H2AQ7L7L0 130 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 TBC1D21Q8IYX1 336 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 METTL6Q8TCB7 284 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 HIST1H2ACQ93077 130 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 KANSL3Q9P2N6 904 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 MAGEL2Q9UJ55 1249 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 IKZF3Q9UKT9 509 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 TRAFD1O14545 582 aaPredicted RBP11.45□□□□□ -0.58
GCN1-201ENST00000300648 RTN3O95197 1032 aaPredicted RBP11.45□□□□□ -0.58
GCN1-201ENST00000300648 CPSF4O95639 269 aaKnown RBP11.45□□□□□ -0.58
GCN1-201ENST00000300648 NDUFB10O96000 172 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 FGRP09769 529 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 HERVK_113P62684 666 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 MTMR2Q13614 643 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 RETSATQ6NUM9 610 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 DSG4Q86SJ6 1040 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 UXS1Q8NBZ7 420 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 DNERQ8NFT8 737 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 GJD4Q96KN9 370 aaPredicted RBP11.45□□□□□ -0.58
GCN1-201ENST00000300648 TCF12Q99081 682 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 TMEM138Q9NPI0 162 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 TLR8Q9NR97 1041 aaKnown RBP11.45□□□□□ -0.58
GCN1-201ENST00000300648 SAE1Q9UBE0 346 aaPredicted RBP11.45□□□□□ -0.58
GCN1-201ENST00000300648 GPR75-ASB3A0A0A6YYF3 556 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 PRMT5O14744 637 aaPredicted RBP11.44□□□□□ -0.58
GCN1-201ENST00000300648 PRG2P13727 222 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 FOXR2Q6PJQ5 311 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 PHF10Q8WUB8 498 aaKnown RBP11.44□□□□□ -0.58
GCN1-201ENST00000300648 LENG9Q96B70 501 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 TMX2Q9Y320 296 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 AFDNP55196 1824 aaKnown RBP11.44□□□□□ -0.58
GCN1-201ENST00000300648 KIDINS220Q9ULH0 1771 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 PGRMC2O15173 223 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 VIL1P09327 827 aaKnown RBP11.44□□□□□ -0.58
GCN1-201ENST00000300648 GTF2A2P52657 109 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 ZFP69Q49AA0 526 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 FBXO32Q969P5 355 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 GMCL1Q96IK5 515 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 MORF4L1Q9UBU8 362 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 PNMA8BQ9ULN7 279 aaPredicted RBP11.44□□□□□ -0.58
GCN1-201ENST00000300648 SEC22BO75396 215 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 PROCP04070 461 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 CHRNGP07510 517 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 CES1P23141 567 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 ALDH7A1P49419 539 aaKnown RBP11.44□□□□□ -0.58
GCN1-201ENST00000300648 IL2P60568 153 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 FOXO4P98177 505 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 SCRN3Q0VDG4 424 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 NUMA1Q14980 2115 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 NIPA1Q7RTP0 329 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 NT5DC3Q86UY8 548 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 PACS2Q86VP3 889 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 NUDT12Q9BQG2 462 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 VPS45Q9NRW7 570 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 PRR12Q9ULL5 1215 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 MGAT4AQ9UM21 535 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 BAIAP2Q9UQB8 552 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 DCXO43602 365 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 C21orf2O43822 256 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 KHDRBS3O75525 346 aaKnown RBP11.44□□□□□ -0.58
GCN1-201ENST00000300648 RRM1P23921 792 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 GALNT3Q14435 633 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 HKDC1Q2TB90 917 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 C11orf96Q7Z7L8 435 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 SNX32Q86XE0 403 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 GMCL1P1Q8NEA9 526 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 RFT1Q96AA3 541 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 TMEM176AQ96HP8 235 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 EHD1Q9H4M9 534 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 GMPPBQ9Y5P6 360 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 STK25O00506 426 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 APOC1P02654 83 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 NR2F6P10588 404 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 PTX3P26022 381 aaPredicted RBP11.44□□□□□ -0.58
GCN1-201ENST00000300648 UGT1A5P35504 534 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 ELK3P41970 407 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 MILR1Q7Z6M3 343 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 COLGALT1Q8NBJ5 622 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 FAM126AQ9BYI3 521 aaPredicted RBP11.44□□□□□ -0.58
GCN1-201ENST00000300648 FAM124BQ9H5Z6 455 aaPredicted RBP11.44□□□□□ -0.58
GCN1-201ENST00000300648 TRIM38O00635 465 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 SMNDC1O75940 238 aaKnown RBP eCLIP11.44□□□□□ -0.586e-14■■■■□ 22.9
GCN1-201ENST00000300648 ITGAVP06756 1048 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 CCR3P51677 355 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 PEX6Q13608 980 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 ZC2HC1CQ53FD0 456 aaPredicted RBP11.44□□□□□ -0.58
GCN1-201ENST00000300648 FKBP1CQ5VVH2 108 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 PLEKHG4BQ96PX9 1271 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 BBS4Q96RK4 519 aa11.44□□□□□ -0.58
GCN1-201ENST00000300648 ZNF607Q96SK3 696 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms