RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 CDY1Q9Y6F8 540 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 BPTFQ12830 3046 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 DNAH12Q6ZR08 3092 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 C9IYK1 514 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 LYNP07948 512 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 MYL3P08590 195 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 MYL4P12829 197 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 GLDCP23378 1020 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 GJA9P57773 515 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 ASPHQ12797 758 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 ZNF460Q14592 562 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 RAB41Q5JT25 222 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 AAGABQ6PD74 315 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 PDZD4Q76G19 769 aaPredicted RBP13.87□□□□□ -0.19
BCCIP-202ENST00000299130 SPATA6LQ8N4H0 392 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 TEKT5Q96M29 485 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 WDCPQ9H6R7 721 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 OXSMQ9NWU1 459 aa13.87□□□□□ -0.19
BCCIP-202ENST00000299130 RNASEH1O60930 286 aaKnown RBP13.86□□□□□ -0.19
BCCIP-202ENST00000299130 SMIM24O75264 130 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 MT-CYBP00156 380 aaPredicted RBP13.86□□□□□ -0.19
BCCIP-202ENST00000299130 HCAR3P49019 387 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 CSRP3P50461 194 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 CRYBB1P53674 252 aaPredicted RBP13.86□□□□□ -0.19
BCCIP-202ENST00000299130 MSLNQ13421 630 aaPredicted RBP13.86□□□□□ -0.19
BCCIP-202ENST00000299130 EP400NLQ6ZTU2 488 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 ZC3HC1Q86WB0 502 aaKnown RBP13.86□□□□□ -0.19
BCCIP-202ENST00000299130 MFSD6LQ8IWD5 586 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 FBXW8Q8N3Y1 598 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 ZNF483Q8TF39 744 aaPredicted RBP13.86□□□□□ -0.19
BCCIP-202ENST00000299130 GAD1Q99259 594 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 PTPN18Q99952 460 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 ACE2Q9BYF1 805 aaPredicted RBP13.86□□□□□ -0.19
BCCIP-202ENST00000299130 DNAI2Q9GZS0 605 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 FAM96AQ9H5X1 160 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 TASP1Q9H6P5 420 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 CNGB3Q9NQW8 809 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 TMEM114B3SHH9 223 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 HAS3O00219 553 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 FBXO21O94952 628 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 JUNP05412 331 aaKnown RBP13.86□□□□□ -0.19
BCCIP-202ENST00000299130 SRGAP2BP0DMP2 458 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 PEX2P28328 305 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 EPHA3P29320 983 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 NPY2RP49146 381 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 ADGRG6Q86SQ4 1221 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 SLC41A1Q8IVJ1 513 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 ZC3H15Q8WU90 426 aaKnown RBP13.86□□□□□ -0.19
BCCIP-202ENST00000299130 KCTD4Q8WVF5 259 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 ZNF236Q9UL36 1845 aa13.86□□□□□ -0.19
BCCIP-202ENST00000299130 H3BNX3 289 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 NCAM2O15394 837 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 AHSGP02765 367 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 GRIA4P48058 902 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 CXCR3P49682 368 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 AIF1P55008 147 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 CSE1LP55060 971 aaKnown RBP13.85□□□□□ -0.19
BCCIP-202ENST00000299130 MPP1Q00013 466 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 FRG1Q14331 258 aaKnown RBP13.85□□□□□ -0.19
BCCIP-202ENST00000299130 LSM12Q3MHD2 195 aaKnown RBP13.85□□□□□ -0.19
BCCIP-202ENST00000299130 ARL13AQ5H913 290 aaPredicted RBP13.85□□□□□ -0.19
BCCIP-202ENST00000299130 TMEM198Q66K66 360 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 TAC4Q86UU9 113 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 PDSS2Q86YH6 399 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 DENND6AQ8IWF6 608 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 SPDYE1Q8NFV5 336 aaPredicted RBP13.85□□□□□ -0.19
BCCIP-202ENST00000299130 PGAP3Q96FM1 320 aaPredicted RBP13.85□□□□□ -0.19
BCCIP-202ENST00000299130 GPR22Q99680 433 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 FTHL17Q9BXU8 183 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 IL22Q9GZX6 179 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 TCF7L2Q9NQB0 619 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 ZDHHC2Q9UIJ5 367 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 TRHDEQ9UKU6 1024 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 SSX2IPQ9Y2D8 614 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 RAD54BQ9Y620 910 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 MATN2O00339 956 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 AIM2O14862 343 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 GRID2O43424 1007 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 TIMM44O43615 452 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 PIGNO95427 931 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 SLC35E2BP0CK96 405 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 RAG1P15918 1043 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 PIK3R1P27986 724 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 NUMBP49757 651 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 NAGLUP54802 743 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 AQP4P55087 323 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 CTBP1Q13363 440 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 USP10Q14694 798 aaKnown RBP13.85□□□□□ -0.19
BCCIP-202ENST00000299130 CCL14Q16627 93 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 CENPLQ8N0S6 344 aaPredicted RBP13.85□□□□□ -0.19
BCCIP-202ENST00000299130 GDPD5Q8WTR4 605 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 MARK4Q96L34 752 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 NR1H4Q96RI1 486 aaPredicted RBP13.85□□□□□ -0.19
BCCIP-202ENST00000299130 TSC22D3Q99576 134 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 NUF2Q9BZD4 464 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 ILKAPQ9H0C8 392 aaPredicted RBP13.85□□□□□ -0.19
BCCIP-202ENST00000299130 ARHGAP26Q9UNA1 814 aa13.85□□□□□ -0.19
BCCIP-202ENST00000299130 RUVBL2Q9Y230 463 aaKnown RBP13.85□□□□□ -0.19
BCCIP-202ENST00000299130 DOCK3Q8IZD9 2030 aa13.84□□□□□ -0.19
BCCIP-202ENST00000299130 CASTOR2A6NHX0 329 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms