RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 FLT3P36888 993 aa21.64■■□□□ 1.05
SMCO4-201ENST00000298966 DGKGP49619 791 aa21.64■■□□□ 1.05
SMCO4-201ENST00000298966 SLC5A3P53794 718 aa21.64■■□□□ 1.05
SMCO4-201ENST00000298966 COPS2P61201 443 aa21.64■■□□□ 1.05
SMCO4-201ENST00000298966 IL27RAQ6UWB1 636 aa21.64■■□□□ 1.05
SMCO4-201ENST00000298966 HTR3DQ70Z44 454 aa21.64■■□□□ 1.05
SMCO4-201ENST00000298966 EMC1Q8N766 993 aa21.64■■□□□ 1.05
SMCO4-201ENST00000298966 CADM4Q8NFZ8 388 aa21.64■■□□□ 1.05
SMCO4-201ENST00000298966 FAM149B1Q96BN6 582 aa21.64■■□□□ 1.05
SMCO4-201ENST00000298966 PRDM16Q9HAZ2 1276 aa21.64■■□□□ 1.05
SMCO4-201ENST00000298966 IL21RQ9HBE5 538 aa21.64■■□□□ 1.05
SMCO4-201ENST00000298966 WSB2Q9NYS7 404 aaPredicted RBP21.64■■□□□ 1.05
SMCO4-201ENST00000298966 IL37Q9NZH6 218 aa21.64■■□□□ 1.05
SMCO4-201ENST00000298966 MARK1Q9P0L2 795 aa21.64■■□□□ 1.05
SMCO4-201ENST00000298966 LSM7Q9UK45 103 aaKnown RBP21.64■■□□□ 1.05
SMCO4-201ENST00000298966 TLR5O60602 858 aa21.63■■□□□ 1.05
SMCO4-201ENST00000298966 LRCH4O75427 683 aa21.63■■□□□ 1.05
SMCO4-201ENST00000298966 LTFP02788 710 aa21.63■■□□□ 1.05
SMCO4-201ENST00000298966 ZDHHC11BP0C7U3 371 aa21.63■■□□□ 1.05
SMCO4-201ENST00000298966 DNA2P51530 1060 aa21.63■■□□□ 1.05
SMCO4-201ENST00000298966 RNASE9P60153 205 aaKnown RBP21.63■■□□□ 1.05
SMCO4-201ENST00000298966 SLC25A52Q3SY17 297 aa21.63■■□□□ 1.05
SMCO4-201ENST00000298966 TPGS1Q6ZTW0 290 aa21.63■■□□□ 1.05
SMCO4-201ENST00000298966 RCOR2Q8IZ40 523 aa21.63■■□□□ 1.05
SMCO4-201ENST00000298966 GALNT15Q8N3T1 639 aa21.63■■□□□ 1.05
SMCO4-201ENST00000298966 RHBDD1Q8TEB9 315 aa21.63■■□□□ 1.05
SMCO4-201ENST00000298966 CENPIQ92674 756 aaPredicted RBP21.63■■□□□ 1.05
SMCO4-201ENST00000298966 ALG3Q92685 438 aa21.63■■□□□ 1.05
SMCO4-201ENST00000298966 KRT35Q92764 455 aa21.63■■□□□ 1.05
SMCO4-201ENST00000298966 PIWIL1Q96J94 861 aaKnown RBP21.63■■□□□ 1.05
SMCO4-201ENST00000298966 WASH3PC4AMC7 463 aa21.62■■□□□ 1.05
SMCO4-201ENST00000298966 CCDC188H7C350 402 aa21.62■■□□□ 1.05
SMCO4-201ENST00000298966 BCAT2O15382 392 aaPredicted RBP21.62■■□□□ 1.05
SMCO4-201ENST00000298966 FLRT2O43155 660 aa21.62■■□□□ 1.05
SMCO4-201ENST00000298966 ZRANB2O95218 330 aaKnown RBP eCLIP21.62■■□□□ 1.05
SMCO4-201ENST00000298966 ATXN1LP0C7T5 689 aaKnown RBP21.62■■□□□ 1.05
SMCO4-201ENST00000298966 SSR1P43307 286 aaKnown RBP21.62■■□□□ 1.05
SMCO4-201ENST00000298966 PSEN1P49768 467 aa21.62■■□□□ 1.05
SMCO4-201ENST00000298966 CYP4F3Q08477 520 aa21.62■■□□□ 1.05
SMCO4-201ENST00000298966 CCDC14Q49A88 953 aa21.62■■□□□ 1.05
SMCO4-201ENST00000298966 BOLA3Q53S33 107 aa21.62■■□□□ 1.05
SMCO4-201ENST00000298966 ODF2Q5BJF6 829 aa21.62■■□□□ 1.05
SMCO4-201ENST00000298966 DCAF12L1Q5VU92 463 aa21.62■■□□□ 1.05
SMCO4-201ENST00000298966 VSIG1Q86XK7 387 aa21.62■■□□□ 1.05
SMCO4-201ENST00000298966 BAHD1Q8TBE0 780 aaPredicted RBP21.62■■□□□ 1.05
SMCO4-201ENST00000298966 TEKT4Q8WW24 435 aa21.62■■□□□ 1.05
SMCO4-201ENST00000298966 NT5C3BQ969T7 300 aa21.62■■□□□ 1.05
SMCO4-201ENST00000298966 ITM2CQ9NQX7 267 aa21.62■■□□□ 1.05
SMCO4-201ENST00000298966 USP36Q9P275 1121 aaKnown RBP21.62■■□□□ 1.05
SMCO4-201ENST00000298966 SCML2Q9UQR0 700 aa21.62■■□□□ 1.05
SMCO4-201ENST00000298966 FNDC3AQ9Y2H6 1198 aaKnown RBP21.62■■□□□ 1.05
SMCO4-201ENST00000298966 PCDHGB2Q9Y5G2 931 aa21.62■■□□□ 1.05
SMCO4-201ENST00000298966 STON1Q9Y6Q2 735 aa21.62■■□□□ 1.05
SMCO4-201ENST00000298966 SHROOM3Q8TF72 1996 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 ASH1LQ9NR48 2969 aaKnown RBP21.61■■□□□ 1.05
SMCO4-201ENST00000298966 FAM92AA1XBS5 289 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 TRABD2BA6NFA1 517 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 GOLGA8CPA6NN73 597 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 CAPN9O14815 690 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 PRPSAP2O60256 369 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 ENDOD1O94919 500 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 F9P00740 461 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 OXTRP30559 389 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 PTPN7P35236 360 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 AIF1P55008 147 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 TAS2R40P59535 323 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 SLC25A11Q02978 314 aaKnown RBP21.61■■□□□ 1.05
SMCO4-201ENST00000298966 HLA-BQ31612 363 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 FUT11Q495W5 492 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 TEX35Q5T0J7 233 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 GPRIN1Q7Z2K8 1008 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 PSTKQ8IV42 348 aaKnown RBP21.61■■□□□ 1.05
SMCO4-201ENST00000298966 SPATA4Q8NEY3 305 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 CLEC4CQ8WTT0 213 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 PGAP3Q96FM1 320 aaPredicted RBP21.61■■□□□ 1.05
SMCO4-201ENST00000298966 KLF16Q9BXK1 252 aaPredicted RBP21.61■■□□□ 1.05
SMCO4-201ENST00000298966 TLR8Q9NR97 1041 aaKnown RBP21.61■■□□□ 1.05
SMCO4-201ENST00000298966 ABCC13Q9NSE7 274 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 TOR4AQ9NXH8 423 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 EFR3BQ9Y2G0 817 aa21.61■■□□□ 1.05
SMCO4-201ENST00000298966 GOLGA6L10A0A0M3HER8 536 aa21.6■■□□□ 1.05
SMCO4-201ENST00000298966 METTL12A8MUP2 240 aa21.6■■□□□ 1.05
SMCO4-201ENST00000298966 GRAP2O75791 330 aa21.6■■□□□ 1.05
SMCO4-201ENST00000298966 CISD3P0C7P0 127 aa21.6■■□□□ 1.05
SMCO4-201ENST00000298966 SUZ12Q15022 739 aaKnown RBP21.6■■□□□ 1.05
SMCO4-201ENST00000298966 ERCC6LQ2NKX8 1250 aa21.6■■□□□ 1.05
SMCO4-201ENST00000298966 CCDC70Q6NSX1 233 aa21.6■■□□□ 1.05
SMCO4-201ENST00000298966 TRNP1Q6NT89 227 aa21.6■■□□□ 1.05
SMCO4-201ENST00000298966 DEFB106AQ8N104 65 aa21.6■■□□□ 1.05
SMCO4-201ENST00000298966 MMGT1Q8N4V1 131 aa21.6■■□□□ 1.05
SMCO4-201ENST00000298966 FAM172AQ8WUF8 416 aa21.6■■□□□ 1.05
SMCO4-201ENST00000298966 MS4A14Q96JA4 679 aa21.6■■□□□ 1.05
SMCO4-201ENST00000298966 CFAP57Q96MR6 1250 aa21.6■■□□□ 1.05
SMCO4-201ENST00000298966 NPY6RQ99463 290 aa21.6■■□□□ 1.05
SMCO4-201ENST00000298966 KNTC1P50748 2209 aa21.6■■□□□ 1.05
SMCO4-201ENST00000298966 CELSR3Q9NYQ7 3312 aa21.6■■□□□ 1.05
SMCO4-201ENST00000298966 A0A087WV48 116 aa21.59■■□□□ 1.05
SMCO4-201ENST00000298966 YJEFN3A6XGL0 299 aa21.59■■□□□ 1.05
SMCO4-201ENST00000298966 E7ENQ6 273 aa21.59■■□□□ 1.05
SMCO4-201ENST00000298966 NPC1O15118 1278 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms