RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 TANC2Q9HCD6 1990 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 RASGRP1O95267 797 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 ADAMTS2O95450 1211 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 PLA2G4BP0C869 781 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 RARBP10826 455 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 NEK3P51956 506 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 AQP5P55064 265 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 GALK2Q01415 458 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 DEFA6Q01524 100 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 SMYD5Q6GMV2 418 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 RBM43Q6ZSC3 357 aaKnown RBP4.91□□□□□ -1.62
CSMD3-201ENST00000297405 SKA3Q8IX90 412 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 LPCAT1Q8NF37 534 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 WRNIP1Q96S55 665 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 TCF12Q99081 682 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 MMTAG2Q9BU76 263 aaKnown RBP4.91□□□□□ -1.62
CSMD3-201ENST00000297405 C12orf65Q9H3J6 166 aaKnown RBP4.91□□□□□ -1.62
CSMD3-201ENST00000297405 RPF1Q9H9Y2 349 aaKnown RBP4.91□□□□□ -1.62
CSMD3-201ENST00000297405 C19orf12Q9NSK7 152 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 TBC1D22BQ9NU19 505 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 POLR3BQ9NW08 1133 aaPredicted RBP4.91□□□□□ -1.62
CSMD3-201ENST00000297405 TOR4AQ9NXH8 423 aa4.91□□□□□ -1.62
CSMD3-201ENST00000297405 KANTRA0A1W2PQU2 76 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 C1orf196B1AJZ1 125 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 M0R233 179 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 CAPN15O75808 1086 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 CYP1A1P04798 512 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-201ENST00000297405 ITGB6P18564 788 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 TRAM1Q15629 374 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 ZNF699Q32M78 642 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 IDNKQ5T6J7 187 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 GPIHBP1Q8IV16 184 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 UHMK1Q8TAS1 419 aaKnown RBP4.9□□□□□ -1.62
CSMD3-201ENST00000297405 ANKRD49Q8WVL7 239 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 LURAP1Q96LR2 239 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 PHF12Q96QT6 1004 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 CCDC86Q9H6F5 360 aaKnown RBP4.9□□□□□ -1.62
CSMD3-201ENST00000297405 CATSPERBQ9H7T0 1116 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 STUB1Q9UNE7 303 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 BCORL1Q5H9F3 1711 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 FPGTO14772 594 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 INPP4BO15327 924 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 SNX3O60493 162 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 PTTG1O95997 202 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 C8BP07358 591 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 GJA1P17302 382 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 SLC2A5P22732 501 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 CTBP2P56545 445 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 CA9Q16790 459 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 LONRF1Q17RB8 773 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 LRRC24Q50LG9 513 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 PYDC2Q56P42 97 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 AFTPHQ6ULP2 937 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 PTAR1Q7Z6K3 402 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-201ENST00000297405 DCUN1D1Q96GG9 259 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 NSMCE3Q96MG7 304 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 PBDC1Q9BVG4 233 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 SSU72Q9NP77 194 aaKnown RBP4.9□□□□□ -1.62
CSMD3-201ENST00000297405 ARHGEF4Q9NR80 690 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 ANKEF1Q9NU02 776 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 CARNS1A5YM72 827 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 RRN3P2A6NIE6 340 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 EFCAB7A8K855 629 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 NADKO95544 446 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-201ENST00000297405 CD2P06729 351 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 CCNG1P51959 295 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 MTERF2Q49AM1 385 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 MCOLN3Q8TDD5 553 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 RIOK2Q9BVS4 552 aaKnown RBP4.9□□□□□ -1.62
CSMD3-201ENST00000297405 TBC1D10AQ9BXI6 508 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 FN3KQ9H479 309 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 FOLH1BQ9HBA9 442 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 C14orf105Q9NVL8 296 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 GDAQ9Y2T3 454 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 I3L521 148 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 RAB4AP20338 218 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 ALDH9A1P49189 494 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 ADAM8P78325 824 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 PTGR1Q14914 329 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 SCARA5Q6ZMJ2 495 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 MOB2Q70IA6 237 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 SLCO6A1Q86UG4 719 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 LINC00471Q8N535 108 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 FNDC8Q8TC99 324 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 CD101Q93033 1021 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 APOL5Q9BWW9 433 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 GFOD1Q9NXC2 390 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 ADAM28Q9UKQ2 775 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 PCDHA1Q9Y5I3 950 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 IVNS1ABPQ9Y6Y0 642 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 MED14O60244 1454 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 OVOS2A0A0G2JMS6 1433 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 FBP2O00757 339 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 ULK1O75385 1050 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 RLN2P04090 185 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 AMPD1P23109 780 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 CASS4Q9NQ75 786 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 RAB6BQ9NRW1 208 aa4.9□□□□□ -1.62
CSMD3-201ENST00000297405 SMPD3Q9NY59 655 aaPredicted RBP4.9□□□□□ -1.62
CSMD3-201ENST00000297405 DUSP12Q9UNI6 340 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms