RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 SLC41A1Q8IVJ1 513 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 ATPAF2Q8N5M1 289 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 SLC25A41Q8N5S1 370 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.99□□□□□ -0.49
RHO-201ENST00000296271 MAPK15Q8TD08 544 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 VPS39Q96JC1 886 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 SUSD3Q96L08 255 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 CPNE1Q99829 537 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 CRISPLD1Q9H336 500 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 NOL6Q9H6R4 1146 aaKnown RBP11.99□□□□□ -0.49
RHO-201ENST00000296271 TLE6Q9H808 572 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 ARHGEF38Q9NXL2 777 aa11.99□□□□□ -0.49
RHO-201ENST00000296271 MYO16Q9Y6X6 1858 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 G3V2L1 256 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 J3KR12 359 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 BIRC5O15392 142 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 USP1O94782 785 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 MYCP01106 439 aaPredicted RBP11.98□□□□□ -0.49
RHO-201ENST00000296271 AHSGP02765 367 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 HAPLN1P10915 354 aaPredicted RBP11.98□□□□□ -0.49
RHO-201ENST00000296271 RALBP11234 206 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 CKBP12277 381 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 MX2P20592 715 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 PAPOLAP51003 745 aaKnown RBP11.98□□□□□ -0.49
RHO-201ENST00000296271 TSPY1Q01534 308 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 ALFQ53S48 1182 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 PLCD3Q8N3E9 789 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 ZNF781Q8N8C0 355 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 URGCPQ8TCY9 931 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 CCDC106Q9BWC9 280 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 RNPEPL1Q9HAU8 725 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 ACTL7AQ9Y615 435 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 E9PAM4 449 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 UPP2O95045 317 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 IL1BP01584 269 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 SBK3P0C264 359 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 CPA3P15088 417 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 ARSAP15289 507 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 CNTFP26441 200 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 AIF1P55008 147 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 CNGA3Q16281 694 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 PSMD5Q16401 504 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 ZNF789Q5FWF6 425 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 GRTP1Q5TC63 336 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 TRAF7Q6Q0C0 670 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 MIB1Q86YT6 1006 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 CEP97Q8IW35 865 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 TEX9Q8N6V9 391 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 GPATCH11Q8N954 259 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 PIWIL2Q8TC59 973 aaKnown RBP11.98□□□□□ -0.49
RHO-201ENST00000296271 KCTD4Q8WVF5 259 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 OMDQ99983 421 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 OSBPL1AQ9BXW6 950 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 RBM22Q9NW64 420 aaKnown RBP eCLIP11.98□□□□□ -0.49
RHO-201ENST00000296271 NOP53Q9NZM5 478 aaKnown RBP11.98□□□□□ -0.49
RHO-201ENST00000296271 GMIPQ9P107 970 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 DCDC2Q9UHG0 476 aa11.98□□□□□ -0.49
RHO-201ENST00000296271 G3BP2Q9UN86 482 aaKnown RBP11.98□□□□□ -0.49
RHO-201ENST00000296271 GOLGA8QA0A0J9YX86 632 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 GOLGA8OA6NCC3 632 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 GOLGA8NF8WBI6 632 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 ZNF195O14628 629 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 NCAM2O15394 837 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 GNAZP19086 355 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 SERPINB6P35237 376 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 RASSF2P50749 326 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 SLC25A3Q00325 362 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 SEPT6Q14141 434 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 MANEALQ5VSG8 457 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 RSPO2Q6UXX9 243 aaPredicted RBP11.97□□□□□ -0.49
RHO-201ENST00000296271 RPS27LQ71UM5 84 aaKnown RBP11.97□□□□□ -0.49
RHO-201ENST00000296271 LDB1Q86U70 411 aaPredicted RBP11.97□□□□□ -0.49
RHO-201ENST00000296271 THEM5Q8N1Q8 247 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 PHTF2Q8N3S3 785 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 SH3RF2Q8TEC5 729 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 IRGQQ8WZA9 623 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 N4BP2L2Q92802 583 aaPredicted RBP11.97□□□□□ -0.49
RHO-201ENST00000296271 NAT9Q9BTE0 207 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 TBC1D13Q9NVG8 400 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 SOX13Q9UN79 622 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 VWA8A3KMH1 1905 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 LOC100653049A0A140TA62 436 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 KRT34O76011 436 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 CALB2P22676 271 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 CCR1P32246 355 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 SPRP35270 261 aaPredicted RBP11.97□□□□□ -0.49
RHO-201ENST00000296271 IDH3AP50213 366 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 ACLYP53396 1101 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 EFEMP1Q12805 493 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 CDH17Q12864 832 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 SLC9B1Q4ZJI4 515 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 RALGPS1Q5JS13 557 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 RAPH1Q70E73 1250 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 CCDC91Q7Z6B0 441 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 CCNJLQ8IV13 435 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 TMEM151AQ8N4L1 468 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 ACMSDQ8TDX5 336 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 MCUR1Q96AQ8 359 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 SGF29Q96ES7 293 aa11.97□□□□□ -0.49
RHO-201ENST00000296271 FAM161BQ96MY7 647 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms