RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 KLQ9UEF7 1012 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 ASTN1O14525 1302 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 FAM20BO75063 409 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 COX7A2P14406 83 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 RPL9P32969 192 aaKnown RBP17.53■□□□□ 0.4
SHANK1-201ENST00000293441 PCID2Q5JVF3 399 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 ZNF655Q8N720 491 aaPredicted RBP17.53■□□□□ 0.4
SHANK1-201ENST00000293441 CLIP3Q96DZ5 547 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 HTATIP2Q9BUP3 242 aa17.53■□□□□ 0.4
SHANK1-201ENST00000293441 UGCGQ16739 394 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 CYB5D1Q6P9G0 228 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 IFNLR1Q8IU57 520 aaPredicted RBP17.52■□□□□ 0.4
SHANK1-201ENST00000293441 C12orf29Q8N999 325 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 EPS8L1Q8TE68 723 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 CYP3A7-CYP3A51PA0A087WV96 503 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 IFNA16P05015 189 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 ACADSP16219 412 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 CYP3A7P24462 503 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 PSEN1P49768 467 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 ZNF143P52747 638 aaPredicted RBP17.52■□□□□ 0.4
SHANK1-201ENST00000293441 TARBP2Q15633 366 aaKnown RBP17.52■□□□□ 0.4
SHANK1-201ENST00000293441 PRMT9Q6P2P2 845 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 C15orf52Q6ZUT6 534 aaKnown RBP17.52■□□□□ 0.4
SHANK1-201ENST00000293441 EPHX4Q8IUS5 362 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 MYOCQ99972 504 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 EVA1BQ9NVM1 165 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 TMEM51Q9NW97 253 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 ATP9AO75110 1047 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 OTUD3Q5T2D3 398 aaPredicted RBP17.52■□□□□ 0.4
SHANK1-201ENST00000293441 TMC3Q7Z5M5 1100 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 LRRN4Q8WUT4 740 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 L2HGDHQ9H9P8 463 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 PPIEQ9UNP9 301 aaKnown RBP17.52■□□□□ 0.4
SHANK1-201ENST00000293441 PCDHA11Q9Y5I1 949 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 ATG7O95352 703 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 DLGAP3O95886 979 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 SERPINB1P30740 379 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 PRKAG1P54619 331 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 ILF2Q12905 390 aaKnown RBP17.52■□□□□ 0.4
SHANK1-201ENST00000293441 RAB23Q9ULC3 237 aa17.52■□□□□ 0.4
SHANK1-201ENST00000293441 CATP04040 527 aaKnown RBP17.52■□□□□ 0.39
SHANK1-201ENST00000293441 S100A3P33764 101 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 C1DQ13901 141 aaKnown RBP17.52■□□□□ 0.39
SHANK1-201ENST00000293441 NEPROQ6NW34 567 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 CCDC103Q8IW40 242 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 EXOC2Q96KP1 924 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 ADPRHL2Q9NX46 363 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 GIT1Q9Y2X7 761 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 A0A0A0MRY4 1105 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 VPS4BO75351 444 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 UBOX5O94941 541 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 CTPS1P17812 591 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 FASP25445 335 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 PIK3CGP48736 1102 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 GNA13Q14344 377 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 FAM45BPQ6NSW5 357 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 CASP12Q6UXS9 341 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 FAM124AQ86V42 546 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 ANKRD52Q8NB46 1076 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 SPATA13Q96N96 652 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 TBCDQ9BTW9 1192 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 FAM105AQ9NUU6 356 aa17.52■□□□□ 0.39
SHANK1-201ENST00000293441 CYP2C18P33260 490 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 NAB1Q13506 487 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 PCBP1Q15365 356 aaKnown RBP eCLIP17.51■□□□□ 0.39
SHANK1-201ENST00000293441 RINLQ6ZS11 566 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 HIPK3Q9H422 1215 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 IL1RAPL1Q9NZN1 696 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 H3BN98 237 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 FAM153BP0C7A2 387 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 FAM153CQ494X1 144 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 MACC1Q6ZN28 852 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 MAB21L3Q8N8X9 362 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 RXFP1Q9HBX9 757 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 ATP6V1HQ9UI12 483 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 MAGEA13PA6NCF6 341 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 CHURC1-FNTBB4DL54 471 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 H3BMM5 538 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 RAD23AP54725 363 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 GALNT3Q14435 633 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 ADI1Q9BV57 179 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 CD248Q9HCU0 757 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 NTSP30990 170 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 ST3GAL1Q11201 340 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 STXBP5Q5T5C0 1151 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 ZCCHC9Q8N567 271 aaKnown RBP17.51■□□□□ 0.39
SHANK1-201ENST00000293441 HSFY1Q96LI6 401 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 TMEM79Q9BSE2 394 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 ANXA5P08758 320 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 ZCCHC18P0CG32 403 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 MAXP61244 160 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 CSNK2BP67870 215 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 ACSM2AQ08AH3 577 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 ACSM2BQ68CK6 577 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 ANKZF1Q9H8Y5 726 aa17.51■□□□□ 0.39
SHANK1-201ENST00000293441 TMEM88BA6NKF7 163 aa17.5■□□□□ 0.39
SHANK1-201ENST00000293441 MRASO14807 208 aa17.5■□□□□ 0.39
SHANK1-201ENST00000293441 AP5Z1O43299 807 aa17.5■□□□□ 0.39
SHANK1-201ENST00000293441 WBP4O75554 376 aaKnown RBP17.5■□□□□ 0.39
SHANK1-201ENST00000293441 ZNF697Q5TEC3 545 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms