RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ETNK2Q9NVF9 386 aa27.47■■□□□ 1.99
SSU72-201ENST00000291386 R4GN57 208 aa27.47■■□□□ 1.99
SSU72-201ENST00000291386 A0A0U1RQJ8 604 aa27.46■■□□□ 1.99
SSU72-201ENST00000291386 ARHGAP42A6NI28 874 aa27.46■■□□□ 1.99
SSU72-201ENST00000291386 HRO43593 1189 aa27.46■■□□□ 1.99
SSU72-201ENST00000291386 NAP1L1P55209 391 aaKnown RBP27.46■■□□□ 1.99
SSU72-201ENST00000291386 MMRN1Q13201 1228 aa27.46■■□□□ 1.99
SSU72-201ENST00000291386 USP39Q53GS9 565 aaKnown RBP27.46■■□□□ 1.99
SSU72-201ENST00000291386 ANKRD20A8PQ5CZ79 823 aa27.46■■□□□ 1.99
SSU72-201ENST00000291386 LINGO4Q6UY18 593 aa27.46■■□□□ 1.99
SSU72-201ENST00000291386 RNF10Q8N5U6 811 aaKnown RBP27.46■■□□□ 1.99
SSU72-201ENST00000291386 LRRC57Q8N9N7 239 aa27.46■■□□□ 1.99
SSU72-201ENST00000291386 PCDH19Q8TAB3 1148 aa27.46■■□□□ 1.99
SSU72-201ENST00000291386 CASKIN2Q8WXE0 1202 aa27.46■■□□□ 1.99
SSU72-201ENST00000291386 CELF6Q96J87 481 aaKnown RBP27.46■■□□□ 1.99
SSU72-201ENST00000291386 CALN1Q9BXU9 219 aa27.46■■□□□ 1.99
SSU72-201ENST00000291386 KLHL11Q9NVR0 708 aa27.46■■□□□ 1.99
SSU72-201ENST00000291386 C3orf70A6NLC5 250 aaPredicted RBP27.45■■□□□ 1.98
SSU72-201ENST00000291386 PROB1E7EW31 1015 aa27.45■■□□□ 1.98
SSU72-201ENST00000291386 K7ERQ8 282 aa27.45■■□□□ 1.98
SSU72-201ENST00000291386 SMAD6O43541 496 aaKnown RBP27.45■■□□□ 1.98
SSU72-201ENST00000291386 ZNF217O75362 1048 aa27.45■■□□□ 1.98
SSU72-201ENST00000291386 SERPINB6P35237 376 aa27.45■■□□□ 1.98
SSU72-201ENST00000291386 P2RY2P41231 377 aa27.45■■□□□ 1.98
SSU72-201ENST00000291386 ZBTB16Q05516 673 aa27.45■■□□□ 1.98
SSU72-201ENST00000291386 BYSLQ13895 437 aaKnown RBP27.45■■□□□ 1.98
SSU72-201ENST00000291386 ELAVL3Q14576 367 aaKnown RBP27.45■■□□□ 1.98
SSU72-201ENST00000291386 ACCSLQ4AC99 568 aa27.45■■□□□ 1.98
SSU72-201ENST00000291386 INO80DQ53TQ3 878 aaPredicted RBP27.45■■□□□ 1.98
SSU72-201ENST00000291386 KIAA1524Q8TCG1 905 aa27.45■■□□□ 1.98
SSU72-201ENST00000291386 PRCCQ92733 491 aaPredicted RBP27.45■■□□□ 1.98
SSU72-201ENST00000291386 ISG20Q96AZ6 181 aaKnown RBP27.45■■□□□ 1.98
SSU72-201ENST00000291386 ERLEC1Q96DZ1 483 aa27.45■■□□□ 1.98
SSU72-201ENST00000291386 SIPA1Q96FS4 1042 aa27.45■■□□□ 1.98
SSU72-201ENST00000291386 FAM129BQ96TA1 746 aa27.45■■□□□ 1.98
SSU72-201ENST00000291386 EPC1Q9H2F5 836 aa27.45■■□□□ 1.98
SSU72-201ENST00000291386 FAM86C1Q9NVL1 165 aa27.45■■□□□ 1.98
SSU72-201ENST00000291386 LRRD1A4D1F6 860 aa27.44■■□□□ 1.98
SSU72-201ENST00000291386 GRID2IPA4D2P6 1211 aa27.44■■□□□ 1.98
SSU72-201ENST00000291386 ALOX15BO15296 676 aa27.44■■□□□ 1.98
SSU72-201ENST00000291386 CCDC175P0C221 793 aa27.44■■□□□ 1.98
SSU72-201ENST00000291386 PAPOLAP51003 745 aaKnown RBP27.44■■□□□ 1.98
SSU72-201ENST00000291386 PAFAH1B3Q15102 231 aaKnown RBP27.44■■□□□ 1.98
SSU72-201ENST00000291386 MAP7D1Q3KQU3 841 aa27.44■■□□□ 1.98
SSU72-201ENST00000291386 ZFYVE27Q5T4F4 411 aa27.44■■□□□ 1.98
SSU72-201ENST00000291386 C22orf39Q6P5X5 142 aa27.44■■□□□ 1.98
SSU72-201ENST00000291386 SLC6A17Q9H1V8 727 aa27.44■■□□□ 1.98
SSU72-201ENST00000291386 PDFQ9HBH1 243 aa27.44■■□□□ 1.98
SSU72-201ENST00000291386 ITM2CQ9NQX7 267 aa27.44■■□□□ 1.98
SSU72-201ENST00000291386 TRIM10Q9UDY6 481 aa27.44■■□□□ 1.98
SSU72-201ENST00000291386 MFHAS1Q9Y4C4 1052 aa27.44■■□□□ 1.98
SSU72-201ENST00000291386 KRT86O43790 486 aa27.43■■□□□ 1.98
SSU72-201ENST00000291386 PRAMEF11O60813 436 aa27.43■■□□□ 1.98
SSU72-201ENST00000291386 ZNF821O75541 412 aaPredicted RBP27.43■■□□□ 1.98
SSU72-201ENST00000291386 RPP40O75818 363 aaKnown RBP27.43■■□□□ 1.98
SSU72-201ENST00000291386 VAV1P15498 845 aa27.43■■□□□ 1.98
SSU72-201ENST00000291386 RPS14P62263 151 aaKnown RBP27.43■■□□□ 1.98
SSU72-201ENST00000291386 ZNF776Q68DI1 518 aaPredicted RBP27.43■■□□□ 1.98
SSU72-201ENST00000291386 NCBP2-AS2Q69YL0 99 aa27.43■■□□□ 1.98
SSU72-201ENST00000291386 C11orf74Q86VG3 221 aa27.43■■□□□ 1.98
SSU72-201ENST00000291386 ZNF354CQ86Y25 554 aa27.43■■□□□ 1.98
SSU72-201ENST00000291386 PLPP6Q8IY26 295 aa27.43■■□□□ 1.98
SSU72-201ENST00000291386 KATNAL2Q8IYT4 538 aa27.43■■□□□ 1.98
SSU72-201ENST00000291386 PCDH20Q8N6Y1 951 aaKnown RBP27.43■■□□□ 1.98
SSU72-201ENST00000291386 PQLC3Q8N755 202 aa27.43■■□□□ 1.98
SSU72-201ENST00000291386 RNF157Q96PX1 679 aa27.43■■□□□ 1.98
SSU72-201ENST00000291386 USP36Q9P275 1121 aaKnown RBP27.43■■□□□ 1.98
SSU72-201ENST00000291386 SCML1Q9UN30 329 aa27.43■■□□□ 1.98
SSU72-201ENST00000291386 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.43■■□□□ 1.98
SSU72-201ENST00000291386 MACROD2A1Z1Q3 448 aa27.42■■□□□ 1.98
SSU72-201ENST00000291386 MCF2LO15068 1137 aa27.42■■□□□ 1.98
SSU72-201ENST00000291386 RNASEH1O60930 286 aaKnown RBP27.42■■□□□ 1.98
SSU72-201ENST00000291386 IGLV3-19P01714 112 aa27.42■■□□□ 1.98
SSU72-201ENST00000291386 KRT1P04264 644 aa27.42■■□□□ 1.98
SSU72-201ENST00000291386 CTNNA1P35221 906 aaKnown RBP27.42■■□□□ 1.98
SSU72-201ENST00000291386 KIAA1324Q6UXG2 1013 aaKnown RBP27.42■■□□□ 1.98
SSU72-201ENST00000291386 Q6ZVU0 165 aa27.42■■□□□ 1.98
SSU72-201ENST00000291386 SYCE1Q8N0S2 351 aa27.42■■□□□ 1.98
SSU72-201ENST00000291386 STK40Q8N2I9 435 aa27.42■■□□□ 1.98
SSU72-201ENST00000291386 CCDC114Q96M63 670 aa27.42■■□□□ 1.98
SSU72-201ENST00000291386 ACTL7AQ9Y615 435 aa27.42■■□□□ 1.98
SSU72-201ENST00000291386 TNNT1P13805 278 aa27.41■■□□□ 1.98
SSU72-201ENST00000291386 CTNNA2P26232 953 aa27.41■■□□□ 1.98
SSU72-201ENST00000291386 IL10RBQ08334 325 aa27.41■■□□□ 1.98
SSU72-201ENST00000291386 SRSF5Q13243 272 aaKnown RBP27.41■■□□□ 1.98
SSU72-201ENST00000291386 TAZQ16635 292 aa27.41■■□□□ 1.98
SSU72-201ENST00000291386 LRRC49Q8IUZ0 686 aa27.41■■□□□ 1.98
SSU72-201ENST00000291386 OR2A12Q8NGT7 310 aa27.41■■□□□ 1.98
SSU72-201ENST00000291386 OR8D1Q8WZ84 308 aa27.41■■□□□ 1.98
SSU72-201ENST00000291386 FCF1Q9Y324 198 aaKnown RBP27.41■■□□□ 1.98
SSU72-201ENST00000291386 PCDHA3Q9Y5H8 950 aa27.41■■□□□ 1.98
SSU72-201ENST00000291386 DFFAO00273 331 aa27.4■■□□□ 1.98
SSU72-201ENST00000291386 PALMO75781 387 aa27.4■■□□□ 1.98
SSU72-201ENST00000291386 ODF2Q5BJF6 829 aa27.4■■□□□ 1.98
SSU72-201ENST00000291386 SLC9A4Q6AI14 798 aa27.4■■□□□ 1.98
SSU72-201ENST00000291386 DSG4Q86SJ6 1040 aa27.4■■□□□ 1.98
SSU72-201ENST00000291386 NT5DC3Q86UY8 548 aa27.4■■□□□ 1.98
SSU72-201ENST00000291386 TP53INP2Q8IXH6 220 aa27.4■■□□□ 1.98
SSU72-201ENST00000291386 UBE2Q2Q8WVN8 375 aa27.4■■□□□ 1.98
SSU72-201ENST00000291386 RNF25Q96BH1 459 aaPredicted RBP27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms