RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 EEF1DP3Q658K8 133 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 SLC9A9Q8IVB4 645 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 DHRSXQ8N5I4 330 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 EFCAB3Q8N7B9 438 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 C17orf50Q8WW18 174 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 TIMMDC1Q9NPL8 285 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 ARL8BQ9NVJ2 186 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 TRNAU1APQ9NX07 287 aaKnown RBP11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 TRMUO75648 421 aaKnown RBP11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 CNMDO75829 334 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 PROSCO94903 275 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 IL12RB1P42701 662 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 MBTD1Q05BQ5 628 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 MMRN1Q13201 1228 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 LPCAT4Q643R3 524 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 DENND5BQ6ZUT9 1274 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 OTOAQ7RTW8 1153 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 TTC7BQ86TV6 843 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 EXD1Q8NHP7 514 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 ACTL9Q8TC94 416 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 C6orf62Q9GZU0 229 aaPredicted RBP11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 POLR1BQ9H9Y6 1135 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 RPS6KL1Q9Y6S9 549 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 NT5C1B-RDH14C9J2C7 533 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 MTSS1O43312 755 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 NME5P56597 212 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 TAPT1Q6NXT6 567 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 ARHGEF19Q8IW93 802 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 TCF25Q9BQ70 676 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 CERS4Q9HA82 394 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 TSR3Q9UJK0 312 aaKnown RBP11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 SLC13A4Q9UKG4 626 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 TSPAN16Q9UKR8 245 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 KANSL1LA0AUZ9 987 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 SERPINE1P05121 402 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 GLRBP48167 497 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 AAK1Q2M2I8 961 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 KHDC1Q4VXA5 237 aaKnown RBP11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 CARNMT1Q8N4J0 409 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 PRELID2Q8N945 189 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 TDRD5Q8NAT2 981 aaKnown RBP11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 PPP1R14BQ96C90 147 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 TMEM175Q9BSA9 504 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 PCDHA3Q9Y5H8 950 aa11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 COPG1Q9Y678 874 aaKnown RBP11.55□□□□□ -0.56
NPC1L1-201ENST00000289547 PTGES3LE9PB15 166 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 MED26O95402 600 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 TPBGLP0DKB5 382 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 BDNFP23560 247 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 WASHC5Q12768 1159 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 N4BP2L1Q5TBK1 243 aaPredicted RBP11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 DENND1BQ6P3S1 775 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 TTC23LQ6PF05 361 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 GSTCDQ8NEC7 633 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 SMG7Q92540 1137 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 BORCS5Q969J3 196 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 LRRC39Q96DD0 335 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 MMTAG2Q9BU76 263 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 DGCR6LQ9BY27 220 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 UBXN6Q9BZV1 441 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 PDZD7Q9H5P4 517 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 EBF2Q9HAK2 575 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 PCDH9Q9HC56 1237 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 A0A1B0GW55 424 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 RNF103O00237 685 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 APOA4P06727 396 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 DUX4L2P0CJ85 424 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 DUX4L3P0CJ86 424 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 DUX4L4P0CJ87 422 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 DUX4L5P0CJ88 424 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 DUX4L6P0CJ89 424 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 DUX4L7P0CJ90 424 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 NELFEP18615 380 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 ATP6V1B2P21281 511 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 SOX6P35712 828 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 FUT10Q6P4F1 479 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 RNF19BQ6ZMZ0 732 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 CLNKQ7Z7G1 428 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 ZSWIM2Q8NEG5 633 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 BHLHE22Q8NFJ8 381 aaPredicted RBP11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 SLC2A14Q8TDB8 520 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 HPS1Q92902 700 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 PABPC5Q96DU9 382 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 C17orf80Q9BSJ5 609 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 DUX4Q9UBX2 424 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 SMIM28A0A1B0GU29 152 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 C3orf70A6NLC5 250 aaPredicted RBP11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 CCR1P32246 355 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 OR1D2P34982 312 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 TBX4P57082 545 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 PLIN5Q00G26 463 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 DGUOKQ16854 277 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 HECTD3Q5T447 861 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 GPR107Q5VW38 600 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 EGFL8Q99944 293 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 PREBQ9HCU5 417 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 ADAMTS7Q9UKP4 1686 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 NBNO60934 754 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms