RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 TMEM130Q8N3G9 435 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 RP9Q8TA86 221 aaKnown RBP10.22□□□□□ -0.77
HMGCR-201ENST00000287936 UTP4Q969X6 686 aaKnown RBP10.22□□□□□ -0.77
HMGCR-201ENST00000287936 PBXIP1Q96AQ6 731 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 SGF29Q96ES7 293 aa10.22□□□□□ -0.77
HMGCR-201ENST00000287936 RGSL1A5PLK6 1076 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 ENO4A6NNW6 628 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 SKAP2O75563 359 aaPredicted RBP10.21□□□□□ -0.77
HMGCR-201ENST00000287936 SRP72O76094 671 aaKnown RBP10.21□□□□□ -0.77
HMGCR-201ENST00000287936 ALDH1A2O94788 518 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 F2P00734 622 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 RAG1P15918 1043 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 ABCG1P45844 678 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 NDUFV1P49821 464 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 IDH3AP50213 366 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 SCNN1GP51170 649 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 ACTR3P61158 418 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 PLEKHG4Q58EX7 1191 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 GLB1LQ6UWU2 654 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 PTCD2Q8WV60 388 aaKnown RBP10.21□□□□□ -0.77
HMGCR-201ENST00000287936 SH3GL3Q99963 347 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 MRPL46Q9H2W6 279 aaKnown RBP10.21□□□□□ -0.77
HMGCR-201ENST00000287936 COG4Q9H9E3 785 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 NDUFA13Q9P0J0 144 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 GRIA4P48058 902 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 RENBPP51606 427 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 ARPP19P56211 112 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 RAB10P61026 200 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 KLF10Q13118 480 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 GRB14Q14449 540 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 ZNF470Q6ECI4 717 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 KRT80Q6KB66 452 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 FSTL4Q6MZW2 842 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 OSTM1Q86WC4 334 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 PCYOX1LQ8NBM8 494 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 CEP70Q8NHQ1 597 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 PPP1R13LQ8WUF5 828 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 SOCS4Q8WXH5 440 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 EBF4Q9BQW3 602 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 SUDS3Q9H7L9 328 aaPredicted RBP10.21□□□□□ -0.77
HMGCR-201ENST00000287936 S100A14Q9HCY8 104 aa10.21□□□□□ -0.77
HMGCR-201ENST00000287936 GOLGA8TH3BQL2 631 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 GNAZP19086 355 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 HOXA11P31270 313 aaPredicted RBP10.21□□□□□ -0.78
HMGCR-201ENST00000287936 THPOP40225 353 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 TUBP50607 506 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 CCDC142Q17RM4 750 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 TCHHL1Q5QJ38 904 aaPredicted RBP10.21□□□□□ -0.78
HMGCR-201ENST00000287936 SYPL2Q5VXT5 272 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 PKN3Q6P5Z2 889 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 LINC01465Q8N7H1 131 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 PYDC1Q8WXC3 89 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 UROC1Q96N76 676 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 CATSPER2Q96P56 530 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 TRAPPC9Q96Q05 1148 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 MIPEPQ99797 713 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 ZFYVE28Q9HCC9 887 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 PIGVQ9NUD9 493 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 HCRTO43612 131 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 NOL3O60936 208 aaKnown RBP10.21□□□□□ -0.78
HMGCR-201ENST00000287936 SNNO75324 88 aaPredicted RBP10.21□□□□□ -0.78
HMGCR-201ENST00000287936 CCNCP24863 283 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 PPARGP37231 505 aaPredicted RBP10.21□□□□□ -0.78
HMGCR-201ENST00000287936 NAGLUP54802 743 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 NIPAL4Q0D2K0 466 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 MSLNQ13421 630 aaPredicted RBP10.21□□□□□ -0.78
HMGCR-201ENST00000287936 ZYG11AQ6WRX3 759 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 UNC5BQ8IZJ1 945 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 GSTCDQ8NEC7 633 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 DLG3Q92796 817 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.21□□□□□ -0.78
HMGCR-201ENST00000287936 TEKT5Q96M29 485 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 WDR83Q9BRX9 315 aaKnown RBP10.21□□□□□ -0.78
HMGCR-201ENST00000287936 CCDC28BQ9BUN5 200 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 CDHR5Q9HBB8 845 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 GLOD4Q9HC38 313 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 ST3GAL5Q9UNP4 418 aa10.21□□□□□ -0.78
HMGCR-201ENST00000287936 TBX10O75333 385 aa10.2□□□□□ -0.78
HMGCR-201ENST00000287936 SMNDC1O75940 238 aaKnown RBP eCLIP10.2□□□□□ -0.78
HMGCR-201ENST00000287936 S100BP04271 92 aaPredicted RBP10.2□□□□□ -0.78
HMGCR-201ENST00000287936 LRPAP1P30533 357 aa10.2□□□□□ -0.78
HMGCR-201ENST00000287936 ADSLP30566 484 aaPredicted RBP10.2□□□□□ -0.78
HMGCR-201ENST00000287936 CSHL1Q14406 222 aa10.2□□□□□ -0.78
HMGCR-201ENST00000287936 NFE2Q16621 373 aaPredicted RBP10.2□□□□□ -0.78
HMGCR-201ENST00000287936 NEPROQ6NW34 567 aa10.2□□□□□ -0.78
HMGCR-201ENST00000287936 PIWIL4Q7Z3Z4 852 aaKnown RBP10.2□□□□□ -0.78
HMGCR-201ENST00000287936 SLC41A1Q8IVJ1 513 aa10.2□□□□□ -0.78
HMGCR-201ENST00000287936 CLPTM1LQ96KA5 538 aa10.2□□□□□ -0.78
HMGCR-201ENST00000287936 SLC2A13Q96QE2 648 aa10.2□□□□□ -0.78
HMGCR-201ENST00000287936 CAB39LQ9H9S4 337 aa10.2□□□□□ -0.78
HMGCR-201ENST00000287936 MFHAS1Q9Y4C4 1052 aa10.2□□□□□ -0.78
HMGCR-201ENST00000287936 NR2E3Q9Y5X4 410 aa10.2□□□□□ -0.78
HMGCR-201ENST00000287936 YJEFN3A6XGL0 299 aa10.2□□□□□ -0.78
HMGCR-201ENST00000287936 CASQ2O14958 399 aaPredicted RBP10.2□□□□□ -0.78
HMGCR-201ENST00000287936 TRPA1O75762 1119 aa10.2□□□□□ -0.78
HMGCR-201ENST00000287936 ME2P23368 584 aa10.2□□□□□ -0.78
HMGCR-201ENST00000287936 ATP5F1P24539 256 aaPredicted RBP10.2□□□□□ -0.78
HMGCR-201ENST00000287936 USP4Q13107 963 aa10.2□□□□□ -0.78
HMGCR-201ENST00000287936 PAN2Q504Q3 1202 aaKnown RBP10.2□□□□□ -0.78
HMGCR-201ENST00000287936 FBXW8Q8N3Y1 598 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms