RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ARMCX4Q5H9R4 360 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 ZNF470Q6ECI4 717 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 TAF2Q6P1X5 1199 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 RBM15BQ8NDT2 890 aaKnown RBP12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 SLC35B2Q8TB61 432 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 UBASH3BQ8TF42 649 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 DGCR14Q96DF8 476 aaKnown RBP12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 PGLYRP2Q96PD5 576 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 PHACTR1Q9C0D0 580 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 ADAM7Q9H2U9 754 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 NMRAL1Q9HBL8 299 aa12.75□□□□□ -0.37
SLC6A1-201ENST00000287766 RGS20O76081 388 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 THP07101 528 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 ITGA2BP08514 1039 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 ERCC2P18074 760 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 FASP25445 335 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 EPHA3P29320 983 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 ALDH1A3P47895 512 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 LSM3P62310 102 aaKnown RBP12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 KRR1Q13601 381 aaKnown RBP12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 PCDH19Q8TAB3 1148 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 ASZ1Q8WWH4 475 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 AZIN2Q96A70 460 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 ZNF556Q9HAH1 456 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 PLGRKTQ9HBL7 147 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 C17orf102A2RUQ5 167 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 CXorf49A8MYA2 514 aaPredicted RBP12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 NAA20P61599 178 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 MGAT5BQ3V5L5 792 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 LIN52Q52LA3 116 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 PPP1R15BQ5SWA1 713 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 ZNF554Q86TJ5 538 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 TRIM63Q969Q1 353 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 CERS2Q96G23 380 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 HMG20AQ9NP66 347 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 CACNG4Q9UBN1 327 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 NKX1-2Q9UD57 310 aaPredicted RBP12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 CDV3Q9UKY7 258 aaKnown RBP12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 ABT1Q9ULW3 272 aaKnown RBP12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 MYH7BA7E2Y1 1941 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 TRPC5OSA6NMA1 111 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 NFKB1P19838 968 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 NR2C2P49116 596 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 NR1H2P55055 460 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 PLPPR4Q7Z2D5 763 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 ANKS1BQ7Z6G8 1248 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 STK32CQ86UX6 486 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 MIER2Q8N344 545 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 PCDH20Q8N6Y1 951 aaKnown RBP12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 CCDC185Q8N715 623 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 LPPQ93052 612 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 RPRD1AQ96P16 312 aaPredicted RBP12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 CSPG4P5Q96PW8 444 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 CADM1Q9BY67 442 aaKnown RBP12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 EPB41L4BQ9H329 900 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 WDR55Q9H6Y2 383 aaPredicted RBP12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 PLLPQ9Y342 182 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 SUPT3HB4E1H0 165 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 TRIM24O15164 1050 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 METTL18O95568 372 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 PPARGP37231 505 aaPredicted RBP12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 IL12RB1P42701 662 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 GSSP48637 474 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 CCT3P49368 545 aaKnown RBP12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 RIPK1Q13546 671 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 KRT72Q14CN4 511 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 CERCAMQ5T4B2 595 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 ATG14Q6ZNE5 492 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 CHSY1Q86X52 802 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 MPP5Q8N3R9 675 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 GMLQ99445 158 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 ARHGEF3Q9NR81 526 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 SLC38A7Q9NVC3 462 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 CCDC167Q9P0B6 97 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 OR12D3Q9UGF7 316 aa12.74□□□□□ -0.37
SLC6A1-201ENST00000287766 PDZK1P1A8MUH7 402 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 PMM2O15305 246 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 MTSS1O43312 755 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 CSH1P0DML2 217 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 CSH2P0DML3 217 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 PTPN1P18031 435 aaKnown RBP12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 CNTFP26441 200 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 CSE1LP55060 971 aaKnown RBP12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 CDC42EP1Q00587 391 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 CTBP1Q13363 440 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 CARTPTQ16568 116 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 GSTA3Q16772 222 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 PLEKHH3Q7Z736 793 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 ULK2Q8IYT8 1036 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 DHRSXQ8N5I4 330 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 TNIP2Q8NFZ5 429 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 SENP8Q96LD8 212 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 ZFP42Q96MM3 310 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 PDZD7Q9H5P4 517 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 POLR1BQ9H9Y6 1135 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 GPAMQ9HCL2 828 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 PCDHGC3Q9UN70 934 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 IPPQ9Y573 584 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 WASF2Q9Y6W5 498 aa12.73□□□□□ -0.37
SLC6A1-201ENST00000287766 NR5A2O00482 541 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms