RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 AGAP2Q99490 1192 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 EIF2AQ9BY44 585 aaKnown RBP13.05□□□□□ -0.32
HERC6-202ENST00000273960 MUC3BQ9H195 1237 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 FBXO40Q9UH90 709 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 ZNF229Q9UJW7 825 aa13.05□□□□□ -0.32
HERC6-202ENST00000273960 CNTNAP1P78357 1384 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 CLOCKO15516 846 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 PRPSAP2O60256 369 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 SPAG6O75602 509 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 IL1BP01584 269 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 ICAM1P05362 532 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 PDGFRAP16234 1089 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 TKTP29401 623 aaKnown RBP13.04□□□□□ -0.32
HERC6-202ENST00000273960 MLLT10P55197 1068 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 GBE1Q04446 702 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 CA9Q16790 459 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 TKFCQ3LXA3 575 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 ANKRD26P1Q6NSI1 321 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 EPGNQ6UW88 154 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 PIGZQ86VD9 579 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 TICAM1Q8IUC6 712 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 ACVR1CQ8NER5 493 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 OR9I1Q8NGQ6 314 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 SYTL5Q8TDW5 730 aaPredicted RBP13.04□□□□□ -0.32
HERC6-202ENST00000273960 STARD8Q92502 1023 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 HTRA1Q92743 480 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 TANKQ92844 425 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 KCNN1Q92952 543 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 SLC2A11Q9BYW1 496 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 POLR3FQ9H1D9 316 aaPredicted RBP13.04□□□□□ -0.32
HERC6-202ENST00000273960 TASP1Q9H6P5 420 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 PTPRHQ9HD43 1115 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 MRPL42Q9Y6G3 142 aaKnown RBP13.04□□□□□ -0.32
HERC6-202ENST00000273960 NFASCO94856 1347 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 PRDX6P30041 224 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 AGKQ53H12 422 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 SMUG1Q53HV7 270 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 ARL13AQ5H913 290 aaPredicted RBP13.04□□□□□ -0.32
HERC6-202ENST00000273960 DCAF15Q66K64 600 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 RNF135Q8IUD6 432 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 C12orf56Q8IXR9 622 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 SIGLEC10Q96LC7 697 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 NSMCE3Q96MG7 304 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 ILKAPQ9H0C8 392 aaPredicted RBP13.04□□□□□ -0.32
HERC6-202ENST00000273960 PALMDQ9NP74 551 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 SNX15Q9NRS6 342 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 CNOT6Q9ULM6 557 aaKnown RBP13.04□□□□□ -0.32
HERC6-202ENST00000273960 SLC8A2Q9UPR5 921 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 SCN9AQ15858 1988 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 MYO1DO94832 1006 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 HNRNPLP14866 589 aaKnown RBP eCLIP13.04□□□□□ -0.32
HERC6-202ENST00000273960 PRKCHP24723 683 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 ATXN1P54253 815 aaKnown RBP13.04□□□□□ -0.32
HERC6-202ENST00000273960 STILQ15468 1287 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 COL24A1Q17RW2 1714 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 NLGN2Q8NFZ4 835 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 MAGEE2Q8TD90 523 aaPredicted RBP13.04□□□□□ -0.32
HERC6-202ENST00000273960 CDKL2Q92772 493 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 FANCEQ9HB96 536 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 CYP4F12Q9HCS2 524 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 ITM2CQ9NQX7 267 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 ATAD3AQ9NVI7 634 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 GIN1Q9NXP7 522 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 ZDHHC2Q9UIJ5 367 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 SLC39A10Q9ULF5 831 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 ATP11BQ9Y2G3 1177 aa13.04□□□□□ -0.32
HERC6-202ENST00000273960 BCAS2O75934 225 aaPredicted RBP13.03□□□□□ -0.32
HERC6-202ENST00000273960 ERBB2P04626 1255 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 MATN1P21941 496 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 GABRB3P28472 473 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 PRKCQQ04759 706 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 CLCQ05315 142 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 ZNF460Q14592 562 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 LRRC38Q5VT99 294 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 CARM1Q86X55 608 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 CADM3Q8N126 398 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 CCNYQ8ND76 341 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 TRPM4Q8TD43 1214 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 CCDC90BQ9GZT6 254 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 GIT1Q9Y2X7 761 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 PCDHGA3Q9Y5H0 932 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 NFKBIEO00221 500 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 CHADO15335 359 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 AQP9O43315 295 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 ALDH2P05091 517 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 ZNF12P17014 697 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 GRK2P25098 689 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 MZF1P28698 734 aaPredicted RBP13.03□□□□□ -0.32
HERC6-202ENST00000273960 TUFMP49411 452 aaKnown RBP13.03□□□□□ -0.32
HERC6-202ENST00000273960 FKBP1AP62942 108 aaKnown RBP13.03□□□□□ -0.32
HERC6-202ENST00000273960 HMBOX1Q6NT76 420 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 THNSL1Q8IYQ7 743 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 PLD5Q8N7P1 536 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 ZC3H15Q8WU90 426 aaKnown RBP13.03□□□□□ -0.32
HERC6-202ENST00000273960 RXFP2Q8WXD0 754 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 OTUD5Q96G74 571 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 GMLQ99445 158 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 NPLQ9BXD5 320 aaPredicted RBP13.03□□□□□ -0.32
HERC6-202ENST00000273960 NCKIPSDQ9NZQ3 722 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 GINS2Q9Y248 185 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms