RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 MED11Q9P086 117 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 EIF3KQ9UBQ5 218 aaKnown RBP15.98■□□□□ 0.15
UBR3-201ENST00000272793 TNRQ92752 1358 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 ITSN2Q9NZM3 1697 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 BCAS1O75363 584 aaPredicted RBP15.98■□□□□ 0.15
UBR3-201ENST00000272793 RAG1P15918 1043 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 ITGALP20701 1170 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 ITGA9Q13797 1035 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 CSHL1Q14406 222 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 ABCA11PQ4W5N1 156 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 ZNF563Q8TA94 476 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 PTCD3Q96EY7 689 aaKnown RBP15.98■□□□□ 0.15
UBR3-201ENST00000272793 UBP1Q9NZI7 540 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 TBC1D30Q9Y2I9 924 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 OR10H1Q9Y4A9 318 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 SSX4O60224 188 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 CCNKO75909 580 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 UBOX5O94941 541 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 MYL4P12829 197 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 CASP9P55211 416 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 ADAM8P78325 824 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 SLC18A3Q16572 532 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 PCNX4Q63HM2 1172 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 RNF148Q8N7C7 305 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 HASPINQ8TF76 798 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 SKA1Q96BD8 255 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 PPEF2O14830 753 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 AP3S2P59780 193 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 BOP1Q14137 746 aaKnown RBP15.98■□□□□ 0.15
UBR3-201ENST00000272793 SAMD4BQ5PRF9 694 aaKnown RBP15.98■□□□□ 0.15
UBR3-201ENST00000272793 EIF2AK1Q9BQI3 630 aaKnown RBP15.98■□□□□ 0.15
UBR3-201ENST00000272793 NT5C1AQ9BXI3 368 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 hCG_1984214I3L0E3 225 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 GPD1P21695 349 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 PROSER3Q2NL68 480 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 TRMT5Q32P41 509 aaKnown RBP15.98■□□□□ 0.15
UBR3-201ENST00000272793 POMZP3Q6PJE2 187 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 ATP6V1C2Q8NEY4 427 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 SMG7Q92540 1137 aaKnown RBP15.98■□□□□ 0.15
UBR3-201ENST00000272793 ELAC1Q9H777 363 aaKnown RBP15.98■□□□□ 0.15
UBR3-201ENST00000272793 TUBG2Q9NRH3 451 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 B8ZZF3 427 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 BAG6P46379 1132 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 OFCC1Q8IZS5 231 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 MYCBPAPQ8TBZ2 947 aa15.98■□□□□ 0.15
UBR3-201ENST00000272793 ROPN1BQ9BZX4 212 aaPredicted RBP15.98■□□□□ 0.15
UBR3-201ENST00000272793 ROPN1Q9HAT0 212 aaPredicted RBP15.98■□□□□ 0.15
UBR3-201ENST00000272793 CD4P01730 458 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 HMGCRP04035 888 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 NMT1P30419 496 aaKnown RBP15.97■□□□□ 0.15
UBR3-201ENST00000272793 FDFT1P37268 417 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 RBP5P82980 135 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 USP41Q3LFD5 358 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 UBXN11Q5T124 520 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 RGL4Q8IZJ4 473 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 FBXO30Q8TB52 745 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 RSAD1Q9HA92 442 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 ZNF221Q9UK13 617 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 GNALP38405 381 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 C17orf50Q8WW18 174 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 MRPL9Q9BYD2 267 aaKnown RBP15.97■□□□□ 0.15
UBR3-201ENST00000272793 ABCB9Q9NP78 766 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 C15orf38-AP3S2A0A0A6YYH1 394 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 KCTD8Q6ZWB6 473 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 C11orf65Q8NCR3 313 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 SH3RF3Q8TEJ3 882 aaPredicted RBP15.97■□□□□ 0.15
UBR3-201ENST00000272793 HDAC2Q92769 488 aaKnown RBP15.97■□□□□ 0.15
UBR3-201ENST00000272793 AFF2P51816 1311 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 UBDO15205 165 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 COMTP21964 271 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 BUD31P41223 144 aaPredicted RBP15.97■□□□□ 0.15
UBR3-201ENST00000272793 TSPAN5P62079 268 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 WDR93Q6P2C0 686 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 TBC1D10AQ9BXI6 508 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 FAM196BA6NMK8 535 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 CST8O60676 142 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 LDOC1O95751 146 aaPredicted RBP15.97■□□□□ 0.15
UBR3-201ENST00000272793 PGAM2P15259 253 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 TXNL4AP83876 142 aaKnown RBP15.97■□□□□ 0.15
UBR3-201ENST00000272793 VPS72Q15906 364 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 PAPD7Q5XG87 772 aaKnown RBP15.97■□□□□ 0.15
UBR3-201ENST00000272793 GRHL2Q6ISB3 625 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 TRIM40Q6P9F5 258 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 FCRL4Q96PJ5 515 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 GRHL1Q9NZI5 618 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 UPB1Q9UBR1 384 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 GMPPBQ9Y5P6 360 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 SLC16A8O95907 504 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 CSN2P05814 226 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 TFPIP10646 304 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 TCEA1P23193 301 aaKnown RBP15.97■□□□□ 0.15
UBR3-201ENST00000272793 GIT2Q14161 759 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 FAM91A1Q658Y4 838 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 CYB5R4Q7L1T6 521 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 GALNT6Q8NCL4 622 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 OR2L2Q8NH16 312 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 GPAMQ9HCL2 828 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 EDARQ9UNE0 448 aa15.97■□□□□ 0.15
UBR3-201ENST00000272793 CYP11B1P15538 503 aa15.96■□□□□ 0.15
UBR3-201ENST00000272793 PITRM1Q5JRX3 1037 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms