RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 PLLPQ9Y342 182 aa16.93■□□□□ 0.3
CCDC40-201ENST00000269318 ZNF840PA6NDX5 716 aa16.93■□□□□ 0.3
CCDC40-201ENST00000269318 TPH1P17752 444 aa16.93■□□□□ 0.3
CCDC40-201ENST00000269318 GEMP55040 296 aa16.93■□□□□ 0.3
CCDC40-201ENST00000269318 HNRNPDQ14103 355 aaKnown RBP16.93■□□□□ 0.3
CCDC40-201ENST00000269318 LRRC26Q2I0M4 334 aa16.93■□□□□ 0.3
CCDC40-201ENST00000269318 C5orf22Q49AR2 442 aa16.93■□□□□ 0.3
CCDC40-201ENST00000269318 TPGS2Q68CL5 300 aa16.93■□□□□ 0.3
CCDC40-201ENST00000269318 KIFC1Q9BW19 673 aa16.93■□□□□ 0.3
CCDC40-201ENST00000269318 KDM4CQ9H3R0 1056 aa16.93■□□□□ 0.3
CCDC40-201ENST00000269318 CHRAC1Q9NRG0 131 aa16.93■□□□□ 0.3
CCDC40-201ENST00000269318 DNMT3LQ9UJW3 386 aa16.93■□□□□ 0.3
CCDC40-201ENST00000269318 J3KR12 359 aa16.92■□□□□ 0.3
CCDC40-201ENST00000269318 ALDOAP04075 364 aaKnown RBP16.92■□□□□ 0.3
CCDC40-201ENST00000269318 TACR2P21452 398 aa16.92■□□□□ 0.3
CCDC40-201ENST00000269318 ATP5C1P36542 298 aaKnown RBP16.92■□□□□ 0.3
CCDC40-201ENST00000269318 SPOUT1Q5T280 376 aaKnown RBP16.92■□□□□ 0.3
CCDC40-201ENST00000269318 KLHDC10Q6PID8 442 aa16.92■□□□□ 0.3
CCDC40-201ENST00000269318 CIR1Q86X95 450 aaPredicted RBP16.92■□□□□ 0.3
CCDC40-201ENST00000269318 PTPRN2Q92932 1015 aa16.92■□□□□ 0.3
CCDC40-201ENST00000269318 MYRFLQ96LU7 910 aa16.92■□□□□ 0.3
CCDC40-201ENST00000269318 ZNF512Q96ME7 567 aaPredicted RBP16.92■□□□□ 0.3
CCDC40-201ENST00000269318 RPRD1AQ96P16 312 aaPredicted RBP16.92■□□□□ 0.3
CCDC40-201ENST00000269318 ARL2BPQ9Y2Y0 163 aa16.92■□□□□ 0.3
CCDC40-201ENST00000269318 WDR91A4D1P6 747 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 GJB5O95377 273 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 CRHR1P34998 444 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 GP5P40197 560 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 GJA8P48165 433 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 RENBPP51606 427 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 TNK2Q07912 1038 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 LACTB2Q53H82 288 aaPredicted RBP16.91■□□□□ 0.3
CCDC40-201ENST00000269318 FAM117BQ6P1L5 589 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 CCDC117Q8IWD4 279 aaPredicted RBP16.91■□□□□ 0.3
CCDC40-201ENST00000269318 CNPY4Q8N129 248 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 TEX26Q8N6G2 289 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 IPMKQ8NFU5 416 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 TMEM169Q96HH4 297 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 MRGPRX2Q96LB1 330 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 CPNE1Q99829 537 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 SLC25A51Q9H1U9 297 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 PCMTD2Q9NV79 361 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 TRIM43BA6NCK2 446 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 TIMP1P01033 207 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 ITGA2BP08514 1039 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 CSF2RAP15509 400 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 NMBRP28336 390 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 SERPINB4P48594 390 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 MAPKAPK2P49137 400 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 WDR5P61964 334 aaKnown RBP16.91■□□□□ 0.3
CCDC40-201ENST00000269318 SLC10A7Q0GE19 358 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 SMAD1Q15797 465 aaKnown RBP16.91■□□□□ 0.3
CCDC40-201ENST00000269318 PARP15Q460N3 678 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 FAM133BQ5BKY9 247 aaKnown RBP16.91■□□□□ 0.3
CCDC40-201ENST00000269318 TEDDM1Q5T9Z0 273 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 TRPM8Q7Z2W7 1104 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 CMTR2Q8IYT2 770 aaKnown RBP16.91■□□□□ 0.3
CCDC40-201ENST00000269318 NDUFAF2Q8N183 169 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 ANKLE1Q8NAG6 615 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 ACMSDQ8TDX5 336 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 PSMG2Q969U7 264 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 TRIM43Q96BQ3 446 aaPredicted RBP16.91■□□□□ 0.3
CCDC40-201ENST00000269318 FICDQ9BVA6 458 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 SLC13A1Q9BZW2 595 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 IQCGQ9H095 443 aaKnown RBP16.91■□□□□ 0.3
CCDC40-201ENST00000269318 C11orf49Q9H6J7 331 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 MANSC1Q9H8J5 431 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 ENTPD7Q9NQZ7 604 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 YIPF1Q9Y548 306 aa16.91■□□□□ 0.3
CCDC40-201ENST00000269318 COCHO43405 550 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 ACSL4O60488 711 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 RAMP2O60895 175 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 SLC6A4P31645 630 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 RAB33AQ14088 237 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 HECTD3Q5T447 861 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 GRTP1Q5TC63 336 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 KDELC1Q6UW63 502 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 RANBP10Q6VN20 620 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 OTOAQ7RTW8 1153 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 CCDC63Q8NA47 563 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 ARMC5Q96C12 935 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 IMP4Q96G21 291 aaKnown RBP16.9■□□□□ 0.3
CCDC40-201ENST00000269318 TRMT2BQ96GJ1 504 aaKnown RBP16.9■□□□□ 0.3
CCDC40-201ENST00000269318 PAWRQ96IZ0 340 aaKnown RBP16.9■□□□□ 0.3
CCDC40-201ENST00000269318 ZNF778Q96MU6 729 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 AGAP2Q99490 1192 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 MCMBPQ9BTE3 642 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 SP110Q9HB58 689 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 CYP4F11Q9HBI6 524 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 ALG13Q9NP73 1137 aaKnown RBP16.9■□□□□ 0.3
CCDC40-201ENST00000269318 ABCF3Q9NUQ8 709 aa16.9■□□□□ 0.3
CCDC40-201ENST00000269318 TPP1O14773 563 aa16.89■□□□□ 0.3
CCDC40-201ENST00000269318 PMPCBO75439 489 aa16.89■□□□□ 0.3
CCDC40-201ENST00000269318 LAG3P18627 525 aa16.89■□□□□ 0.3
CCDC40-201ENST00000269318 YBEYP58557 167 aaPredicted RBP16.89■□□□□ 0.3
CCDC40-201ENST00000269318 MPP3Q13368 585 aa16.89■□□□□ 0.3
CCDC40-201ENST00000269318 SERINC3Q13530 473 aa16.89■□□□□ 0.3
CCDC40-201ENST00000269318 BTG3Q14201 252 aaPredicted RBP16.89■□□□□ 0.3
CCDC40-201ENST00000269318 POLD3Q15054 466 aaPredicted RBP16.89■□□□□ 0.3
CCDC40-201ENST00000269318 HSP90AA5PQ58FG0 334 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms