RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 LRRC6Q86X45 466 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 ANKRD42Q8N9B4 389 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 IPMKQ8NFU5 416 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 NSMCE1Q8WV22 266 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 POF1BQ8WVV4 589 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 ATXN2LQ8WWM7 1075 aaKnown RBP11.78□□□□□ -0.52
SCAF11-201ENST00000266589 PPP1R2P1Q96PQ5 205 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 C17orf80Q9BSJ5 609 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 RABEP2Q9H5N1 569 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 NT5MQ9NPB1 228 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 SMYD2Q9NRG4 433 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 BFARQ9NZS9 450 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 SENP1Q9P0U3 644 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 CHD5Q8TDI0 1954 aa11.78□□□□□ -0.52
SCAF11-201ENST00000266589 LAMA2P24043 3122 aaKnown RBP11.78□□□□□ -0.52
SCAF11-201ENST00000266589 A0A1W2PPM1 405 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 LINC01553A4QN01 128 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 ERICH4A6NGS2 130 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 FAM159BA6NKW6 160 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 OLFM2O95897 454 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 HDCP19113 662 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 NUMBP49757 651 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 GEMP55040 296 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 CDH17Q12864 832 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 CRYMQ14894 314 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 GAREM2Q75VX8 874 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 SPRED2Q7Z698 418 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 LINC00523Q86TU6 105 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 SLC26A11Q86WA9 606 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 TMC8Q8IU68 726 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 C4orf33Q8N1A6 199 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 ELMOD1Q8N336 334 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 MRPL43Q8N983 215 aaKnown RBP11.77□□□□□ -0.52
SCAF11-201ENST00000266589 SPPL3Q8TCT6 385 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 MGARPQ8TDB4 240 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 MZB1Q8WU39 189 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 MRPS31Q92665 395 aaKnown RBP11.77□□□□□ -0.52
SCAF11-201ENST00000266589 CENPTQ96BT3 561 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 SMC6Q96SB8 1091 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 TBL1YQ9BQ87 522 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 LBHD1Q9BQE6 289 aaPredicted RBP11.77□□□□□ -0.52
SCAF11-201ENST00000266589 EPN3Q9H201 632 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 RETREG1Q9H6L5 497 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 TLR9Q9NR96 1032 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 MOCS1Q9NZB8 636 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 RWDD3Q9Y3V2 267 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 CPQQ9Y646 472 aa11.77□□□□□ -0.52
SCAF11-201ENST00000266589 MTCL1Q9Y4B5 1905 aaKnown RBP11.77□□□□□ -0.53
SCAF11-201ENST00000266589 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.77□□□□□ -0.53
SCAF11-201ENST00000266589 IQANK1A0A1B0GTG1 560 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 H3BNC9 293 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 SCAMP3O14828 347 aaKnown RBP11.77□□□□□ -0.53
SCAF11-201ENST00000266589 TSPAN3O60637 253 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 CLDN11O75508 207 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 FAM155BO75949 473 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 POLBP06746 335 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 SEC24CP53992 1094 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 MAXP61244 160 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 ITKQ08881 620 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 CERCAMQ5T4B2 595 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 CES3Q6UWW8 571 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 UNC5BQ8IZJ1 945 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 TEX26Q8N6G2 289 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 BCAS4Q8TDM0 211 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 SLC22A17Q8WUG5 538 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 DDX50Q9BQ39 737 aaKnown RBP11.77□□□□□ -0.53
SCAF11-201ENST00000266589 FICDQ9BVA6 458 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 LRRC3Q9BY71 257 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 RPS6KL1Q9Y6S9 549 aa11.77□□□□□ -0.53
SCAF11-201ENST00000266589 MYLKQ15746 1914 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 MIA3Q5JRA6 1907 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 A0A0D9SEW6 157 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 A0A1B0GVM2 712 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 TCAF2A6NFQ2 919 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 AP3B1O00203 1094 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 CCL16O15467 120 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 ATP9BO43861 1147 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 PRAMEF11O60813 436 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 SPAG7O75391 227 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 PMPCBO75439 489 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 ALDH1A2O94788 518 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 MYOGP15173 224 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 TPH1P17752 444 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 ETFBP38117 255 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 NPY2RP49146 381 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 CLCN4P51793 760 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 ZXDBP98169 803 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 GNA12Q03113 381 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 DMTNQ08495 405 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 MPP2Q14168 576 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 LRRC14Q15048 493 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 SPANXN3Q5MJ09 141 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 PPM1LQ5SGD2 360 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 CYS1Q717R9 158 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 MAB21L3Q8N8X9 362 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 TTC16Q8NEE8 873 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 OR7D4Q8NG98 312 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 OR52K2Q8NGK3 314 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 MICAL1Q8TDZ2 1067 aa11.76□□□□□ -0.53
SCAF11-201ENST00000266589 ADAMTS19Q8TE59 1207 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms