RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 LENG9Q96B70 501 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 VPS35Q96QK1 796 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 BBS4Q96RK4 519 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TUBA1CQ9BQE3 449 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 LMAN2LQ9H0V9 348 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 MARK1Q9P0L2 795 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 GGT7Q9UJ14 662 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 POLIQ9UNA4 740 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 NR2E1Q9Y466 385 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 ABCA8O94911 1581 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PDE2AO00408 941 aaPredicted RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 NADKO95544 446 aaPredicted RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 CATP04040 527 aaKnown RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 LCP1P13796 627 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 DGKAP23743 735 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TRIM32Q13049 653 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 CUL2Q13617 745 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TOB2Q14106 344 aaPredicted RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 TMEM17Q86X19 198 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 HERC6Q8IVU3 1022 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 SLC30A8Q8IWU4 369 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TATDN2Q93075 761 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TUBGCP5Q96RT8 1024 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 CDRT15Q96T59 188 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 RUSC1Q9BVN2 902 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 AGAP1Q9UPQ3 857 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 DHRS7Q9Y394 339 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PALLDQ8WX93 1383 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 C19orf81C9J6K1 198 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PDLIM1O00151 329 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 C2CD2LO14523 706 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PLOD3O60568 738 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 SCGNO76038 276 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 SNRPB2P08579 225 aaKnown RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 FAM153BP0C7A2 387 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 DSG3P32926 999 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TDGQ13569 410 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 C15orf59Q2T9L4 293 aaPredicted RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 DAGLBQ8NCG7 672 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 CREB3L1Q96BA8 519 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 C8orf37Q96NL8 207 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TAS2R1Q9NYW7 299 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PCDHGB2Q9Y5G2 931 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 USP17L10C9JJH3 530 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 CD2P06729 351 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 CDC25AP30304 524 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 IDH2P48735 452 aaKnown RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 PDX1P52945 283 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PLEKHG4Q58EX7 1191 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 CBWD2Q8IUF1 395 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 ZZZ3Q8IYH5 903 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PTCD2Q8WV60 388 aaKnown RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 DNAJB3Q8WWF6 145 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 SPATA33Q96N06 139 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 TDRD1Q9BXT4 1180 aaKnown RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 UNKQ9C0B0 810 aaKnown RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 CHST12Q9NRB3 414 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 BTG4Q9NY30 223 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 PLK2Q9NYY3 685 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 RCOR3Q9P2K3 495 aaPredicted RBP5.53□□□□□ -1.52
XRN1-201ENST00000264951 TTC37Q6PGP7 1564 aa5.53□□□□□ -1.52
XRN1-201ENST00000264951 CYP3A7-CYP3A51PA0A087WV96 503 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 DHRS12A0PJE2 317 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 USP27XA6NNY8 438 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 CYP2A6P11509 494 aaPredicted RBP5.52□□□□□ -1.53
XRN1-201ENST00000264951 CYP3A7P24462 503 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 RPP38P78345 283 aaKnown RBP5.52□□□□□ -1.53
XRN1-201ENST00000264951 SLC5A9Q2M3M2 681 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 HSD17B12Q53GQ0 312 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 WDR59Q6PJI9 974 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 RAB11FIP2Q7L804 512 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 ADAMTSL2Q86TH1 951 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 ATCAYQ86WG3 371 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 SVOPLQ8N434 492 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 C9orf43Q8TAL5 461 aaPredicted RBP5.52□□□□□ -1.53
XRN1-201ENST00000264951 SEPHS2Q99611 448 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 H7C1W4 665 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 SLC22A1O15245 554 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 CHADO15335 359 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 NR2C1P13056 603 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 PRDX6P30041 224 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 ALDH5A1P51649 535 aaPredicted RBP5.52□□□□□ -1.53
XRN1-201ENST00000264951 MVKQ03426 396 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 GRAPQ13588 217 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 SPATS1Q496A3 300 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 CWF19L1Q69YN2 538 aaKnown RBP5.52□□□□□ -1.53
XRN1-201ENST00000264951 GPAT2Q6NUI2 795 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 GRAPLQ8TC17 118 aaPredicted RBP5.52□□□□□ -1.53
XRN1-201ENST00000264951 AIF1LQ9BQI0 150 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 ARL15Q9NXU5 204 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 OPTCQ9UBM4 332 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 ZNF214Q9UL59 606 aaPredicted RBP5.52□□□□□ -1.53
XRN1-201ENST00000264951 FAM50BQ9Y247 325 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 FARSAQ9Y285 508 aaKnown RBP5.52□□□□□ -1.53
XRN1-201ENST00000264951 PCDHGA4Q9Y5G9 962 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 ADAMDEC1O15204 470 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 YES1P07947 543 aa5.52□□□□□ -1.53
XRN1-201ENST00000264951 SLC2A4P14672 509 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms