RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 PCDHA2Q9Y5H9 948 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 TLR5O60602 858 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 CCDC166P0CW27 439 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 CYP2A6P11509 494 aaPredicted RBP14.19□□□□□ -0.14
CDH3-201ENST00000264012 PSMC3P17980 439 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 ADRA1BP35368 520 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 TCHHL1Q5QJ38 904 aaPredicted RBP14.19□□□□□ -0.14
CDH3-201ENST00000264012 GPSM1Q86YR5 675 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 IQCKQ8N0W5 287 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 RNF148Q8N7C7 305 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 FNIP1Q8TF40 1166 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 MAML3Q96JK9 1138 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 KCTD14Q9BQ13 255 aaPredicted RBP14.19□□□□□ -0.14
CDH3-201ENST00000264012 ITM2BQ9Y287 266 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 SLIT2O94813 1529 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 KCPQ6ZWJ8 1503 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 M0R2N6 131 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 ZNF682O95780 498 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 ANXA11P50995 505 aaKnown RBP14.19□□□□□ -0.14
CDH3-201ENST00000264012 NCALDP61601 193 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 MAD2L1Q13257 205 aaPredicted RBP14.19□□□□□ -0.14
CDH3-201ENST00000264012 ACOX1Q15067 660 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 ZBTB49Q6ZSB9 765 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 RIN3Q8TB24 985 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 NTPCRQ9BSD7 190 aaKnown RBP14.19□□□□□ -0.14
CDH3-201ENST00000264012 MLPHQ9BV36 600 aaPredicted RBP14.19□□□□□ -0.14
CDH3-201ENST00000264012 KLHL4Q9C0H6 718 aa14.19□□□□□ -0.14
CDH3-201ENST00000264012 EXOSC4Q9NPD3 245 aaKnown RBP14.19□□□□□ -0.14
CDH3-201ENST00000264012 CDV3Q9UKY7 258 aaKnown RBP14.19□□□□□ -0.14
CDH3-201ENST00000264012 ZBTB48P10074 688 aaPredicted RBP14.18□□□□□ -0.14
CDH3-201ENST00000264012 ELNP15502 786 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 ATP6V1B2P21281 511 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 PSMD5Q16401 504 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 PDK4Q16654 411 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 BRMS1LQ5PSV4 323 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 USP45Q70EL2 814 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 SERAC1Q96JX3 654 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 CAMKK2Q96RR4 588 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 WDR41Q9HAD4 459 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 ABCC6O95255 1503 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 A0A0G2JLL6 359 aaPredicted RBP14.18□□□□□ -0.14
CDH3-201ENST00000264012 TCRBV7S2A1N4TA0A589 114 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 NT5C1B-RDH14C9J2C7 533 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 ZCCHC18P0CG32 403 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 POLR2EP19388 210 aaKnown RBP14.18□□□□□ -0.14
CDH3-201ENST00000264012 AIF1P55008 147 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 MAXP61244 160 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 SPRYD7Q5W111 196 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 PRRT2Q7Z6L0 340 aaPredicted RBP14.18□□□□□ -0.14
CDH3-201ENST00000264012 ACMSDQ8TDX5 336 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 HGH1Q9BTY7 390 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 TM6SF2Q9BZW4 377 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 PCDHGC3Q9UN70 934 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 SPACA6W5XKT8 324 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 OR6C75A6NL08 312 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 E7ENQ6 273 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 ITGA2BP08514 1039 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 CLCN5P51795 746 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 BST1Q10588 318 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 PFKFB4Q16877 469 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 FAM126BQ8IXS8 530 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 STX19Q8N4C7 294 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 ZNF557Q8N988 423 aaPredicted RBP14.18□□□□□ -0.14
CDH3-201ENST00000264012 STAG3L4Q8TBR4 150 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 GPR152Q8TDT2 470 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 DIS3LQ8TF46 1054 aaKnown RBP14.18□□□□□ -0.14
CDH3-201ENST00000264012 CSPG4P5Q96PW8 444 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 MPP6Q9NZW5 540 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 NDUFA13Q9P0J0 144 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 WRAP73Q9P2S5 460 aaPredicted RBP14.18□□□□□ -0.14
CDH3-201ENST00000264012 ZMYM5Q9UJ78 669 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 FAM237BA0A1B0GVD1 139 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 NFKBIEO00221 500 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 SEC22BO75396 215 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 FGFR1P11362 822 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 SMPD1P17405 629 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 ADSSP30520 456 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 CLK1P49759 484 aaKnown RBP14.18□□□□□ -0.14
CDH3-201ENST00000264012 CSTF3Q12996 717 aaKnown RBP14.18□□□□□ -0.14
CDH3-201ENST00000264012 CCDC85BQ15834 202 aaPredicted RBP14.18□□□□□ -0.14
CDH3-201ENST00000264012 TBCELQ5QJ74 424 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 ZDHHC6Q9H6R6 413 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 CAPN10Q9HC96 672 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 SYBUQ9NX95 663 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 PADI3Q9ULW8 664 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 NRXN3Q9Y4C0 1643 aa14.18□□□□□ -0.14
CDH3-201ENST00000264012 PDZK1P1A8MUH7 402 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 M0R3G1 203 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 SLC35G1Q2M3R5 365 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 MICU2Q8IYU8 434 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 SLC25A23Q9BV35 468 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 MIEF1Q9NQG6 463 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 NOCTQ9UK39 431 aaKnown RBP14.17□□□□□ -0.14
CDH3-201ENST00000264012 hCG_2014768A0A024R1R8 64 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 TRAV19A0A0A6YYK7 116 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 FKTNO75072 461 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 PDE5AO76074 875 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 FCGR1AP12314 374 aa14.17□□□□□ -0.14
CDH3-201ENST00000264012 SMAD3P84022 425 aaKnown RBP14.17□□□□□ -0.14
CDH3-201ENST00000264012 CRY1Q16526 586 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms