RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 DEFB132Q7Z7B7 95 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 DENND6AQ8IWF6 608 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 TTC16Q8NEE8 873 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 SNRNP27Q8WVK2 155 aaKnown RBP12.61□□□□□ -0.39
CHMP3-201ENST00000263856 SIK2Q9H0K1 926 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 CHST12Q9NRB3 414 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 PIGVQ9NUD9 493 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 ZDHHC7Q9NXF8 308 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 ZNF112Q9UJU3 913 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 TIMM13Q9Y5L4 95 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-201ENST00000263856 TPST1O60507 370 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 SEC24DO94855 1032 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-201ENST00000263856 SMIM18P0DKX4 95 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 MLNP12872 115 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 PTPN1P18031 435 aaKnown RBP12.61□□□□□ -0.39
CHMP3-201ENST00000263856 ME2P23368 584 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 PTPN3P26045 913 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 MATKP42679 507 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 RPL5P46777 297 aaKnown RBP12.61□□□□□ -0.39
CHMP3-201ENST00000263856 SNAPC2Q13487 334 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 ADGRE1Q14246 886 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 OTOP3Q7RTS5 596 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 APOBEC3FQ8IUX4 373 aaKnown RBP12.61□□□□□ -0.39
CHMP3-201ENST00000263856 PSTKQ8IV42 348 aaKnown RBP12.61□□□□□ -0.39
CHMP3-201ENST00000263856 ANKRD52Q8NB46 1076 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 IPMKQ8NFU5 416 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 SPATA22Q8NHS9 363 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 FAM81AQ8TBF8 368 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 NAT9Q9BTE0 207 aa12.61□□□□□ -0.39
CHMP3-201ENST00000263856 DFFAO00273 331 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 RECQL4O94761 1208 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 FBXO21O94952 628 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 VAPBO95292 243 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 TFAP2AP05549 437 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 PPARGP37231 505 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-201ENST00000263856 INHBCP55103 352 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 INSCQ1MX18 579 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 MYLK3Q32MK0 819 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 PKDCCQ504Y2 493 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 PITRM1Q5JRX3 1037 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 OGFRL1Q5TC84 451 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-201ENST00000263856 KRT80Q6KB66 452 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 MYO1HQ8N1T3 1032 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 PDCD6IPQ8WUM4 868 aaKnown RBP12.6□□□□□ -0.39
CHMP3-201ENST00000263856 KLHL32Q96NJ5 620 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 SETD4Q9NVD3 440 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 TLL2Q9Y6L7 1015 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 ATP6AP2A0A1C7CYW4 349 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 HACD1B0YJ81 288 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 H3BSA7 217 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 ATP6AP2O75787 350 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 FAM58BPP0C7Q3 252 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 NCAM1P13591 858 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 RPL10P27635 214 aaKnown RBP12.6□□□□□ -0.39
CHMP3-201ENST00000263856 MYBPC1Q00872 1141 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 FBXO47Q5MNV8 452 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 IL23RQ5VWK5 629 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 FSTL5Q8N475 847 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-201ENST00000263856 APPL2Q8NEU8 664 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 ZFP28Q8NHY6 868 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 DGCR14Q96DF8 476 aaKnown RBP12.6□□□□□ -0.39
CHMP3-201ENST00000263856 ELMO2Q96JJ3 720 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 FTHL17Q9BXU8 183 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 VRTNQ9H8Y1 702 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 DDIT4Q9NX09 232 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 GALNT8Q9NY28 637 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 C6orf203Q9P0P8 240 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-201ENST00000263856 RAP2CQ9Y3L5 183 aa12.6□□□□□ -0.39
CHMP3-201ENST00000263856 C9JVG2 144 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 SOCS7O14512 581 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 SPTLC1O15269 473 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 MT-CYBP00156 380 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-201ENST00000263856 SETSIPP0DME0 302 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 ADCYAP1R1P41586 468 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 SCNN1BP51168 640 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 ZBTB17Q13105 803 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 GEN1Q17RS7 908 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 LRRC8EQ6NSJ5 796 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 NXNL1Q96CM4 212 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 PHF21BQ96EK2 531 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 CCT7Q99832 543 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 EFCAB1Q9HAE3 211 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 CDHR5Q9HBB8 845 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 TRPC7Q9HCX4 862 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 SMIM31A0A1B0GVY4 71 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 ANKRD33BA6NCL7 494 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 ADM5C9JUS6 153 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 USP2O75604 605 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-201ENST00000263856 RPS12P25398 132 aaKnown RBP12.59□□□□□ -0.39
CHMP3-201ENST00000263856 RGS2P41220 211 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 SLC12A2P55011 1212 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 SLC25A52Q3SY17 297 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 STXBP5Q5T5C0 1151 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 LIPMQ5VYY2 423 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 B3GNT6Q6ZMB0 384 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 ZBTB46Q86UZ6 589 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 LRTOMTQ8WZ04 291 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 KCNN1Q92952 543 aa12.59□□□□□ -0.39
CHMP3-201ENST00000263856 LENG1Q96BZ8 264 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-201ENST00000263856 SLC39A3Q9BRY0 314 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms