RNA–Protein interactions for RNA: ENST00000263665.6

CNTN3-201, Transcript of contactin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTN3, Length 4,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-201ENST00000263665 FOXN1O15353 648 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 OR2B3O76000 313 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 KRT33AO76009 404 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 KRT34O76011 436 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 CYP1A2P05177 515 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 PVALBP20472 110 aaPredicted RBP6.96□□□□□ -1.3
CNTN3-201ENST00000263665 VARSP26640 1264 aaKnown RBP6.96□□□□□ -1.3
CNTN3-201ENST00000263665 HOXD13P35453 343 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 MAGEA6P43360 314 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 RGS6P49758 472 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 BST2Q10589 180 aaKnown RBP6.96□□□□□ -1.3
CNTN3-201ENST00000263665 CAMK2BQ13554 666 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 ELOAQ14241 798 aaKnown RBP6.96□□□□□ -1.3
CNTN3-201ENST00000263665 PFKFB3Q16875 520 aaPredicted RBP6.96□□□□□ -1.3
CNTN3-201ENST00000263665 LRRC66Q68CR7 880 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 ALKBH2Q6NS38 261 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 NATD1Q8N6N6 113 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 MAGEB6Q8N7X4 407 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 RDM1Q8NG50 284 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 AP2M1Q96CW1 435 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 PPP1R2P1Q96PQ5 205 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 HEMGNQ9BXL5 484 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 SEMA4AQ9H3S1 761 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 RAVER2Q9HCJ3 691 aaKnown RBP6.96□□□□□ -1.3
CNTN3-201ENST00000263665 EMILIN3Q9NT22 766 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 SEC14L4Q9UDX3 406 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 PRELID3BQ9Y3B1 194 aa6.96□□□□□ -1.3
CNTN3-201ENST00000263665 A0A088AWK7 358 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 H7C1Q1 480 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 SSNA1O43805 119 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 DGKIO75912 1065 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 RBP1P09455 135 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 ETFBP38117 255 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 SEPHS1P49903 392 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 NEK3P51956 506 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 GPS1Q13098 491 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 PUM3Q15397 648 aaKnown RBP6.95□□□□□ -1.3
CNTN3-201ENST00000263665 NRF1Q16656 503 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 LINC00299Q6ZSB3 139 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 DPPA2Q7Z7J5 298 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 CHERPQ8IWX8 916 aaKnown RBP6.95□□□□□ -1.3
CNTN3-201ENST00000263665 ZFP28Q8NHY6 868 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 DHX38Q92620 1227 aaKnown RBP6.95□□□□□ -1.3
CNTN3-201ENST00000263665 KAT2AQ92830 837 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 KCNN1Q92952 543 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 RFT1Q96AA3 541 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 TCEAL4Q96EI5 215 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 VCPIP1Q96JH7 1222 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 SERPINB11Q96P15 392 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 FAM111AQ96PZ2 611 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 PHF12Q96QT6 1004 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 KCNN2Q9H2S1 579 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 ALG13Q9NP73 1137 aaKnown RBP6.95□□□□□ -1.3
CNTN3-201ENST00000263665 ATP13A2Q9NQ11 1180 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 SHOC2Q9UQ13 582 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 MYOM1P52179 1685 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 ABCC3O15438 1527 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 ITSN1Q15811 1721 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 F8W031 263 aaPredicted RBP6.95□□□□□ -1.3
CNTN3-201ENST00000263665 J3QRK9 145 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 TCF4P15884 667 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 CYP2C18P33260 490 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 PIK3CGP48736 1102 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 TUBP50607 506 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 EIF5AP63241 154 aaKnown RBP6.95□□□□□ -1.3
CNTN3-201ENST00000263665 CHRNDQ07001 517 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 LSM12Q3MHD2 195 aaKnown RBP6.95□□□□□ -1.3
CNTN3-201ENST00000263665 ANKRD40Q6AI12 368 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 CYP20A1Q6UW02 462 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 PDZD4Q76G19 769 aaPredicted RBP6.95□□□□□ -1.3
CNTN3-201ENST00000263665 LRRC8DQ7L1W4 858 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 ARCQ7LC44 396 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 TDRPQ86YL5 185 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 TBC1D21Q8IYX1 336 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 RP9Q8TA86 221 aaKnown RBP6.95□□□□□ -1.3
CNTN3-201ENST00000263665 ZNF564Q8TBZ8 553 aaPredicted RBP6.95□□□□□ -1.3
CNTN3-201ENST00000263665 TRIM43Q96BQ3 446 aaPredicted RBP6.95□□□□□ -1.3
CNTN3-201ENST00000263665 FBXL8Q96CD0 374 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 PTCD3Q96EY7 689 aaKnown RBP6.95□□□□□ -1.3
CNTN3-201ENST00000263665 CHCHD6Q9BRQ6 235 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 IDI2Q9BXS1 227 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 ILKAPQ9H0C8 392 aaPredicted RBP6.95□□□□□ -1.3
CNTN3-201ENST00000263665 B3GNT2Q9NY97 397 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 PTTG3PQ9NZH4 202 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 MARCOQ9UEW3 520 aaPredicted RBP6.95□□□□□ -1.3
CNTN3-201ENST00000263665 NAGPAQ9UK23 515 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 CLEC4AQ9UMR7 237 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 DLC1Q96QB1 1528 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 C1orf196B1AJZ1 125 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 E7ENX8 843 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 INPPL1O15357 1258 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 HSPA12AO43301 675 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 GCNT3O95395 438 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 SERPINA1P01009 418 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 RASA1P20936 1047 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 NR4A1P22736 598 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 P2RX3P56373 397 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 EIF3EP60228 445 aaKnown RBP6.95□□□□□ -1.3
CNTN3-201ENST00000263665 NOMO3P69849 1222 aa6.95□□□□□ -1.3
CNTN3-201ENST00000263665 HTRA4P83105 476 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms