RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 INSCQ1MX18 579 aa17.71■□□□□ 0.43
NOTCH3-201ENST00000263388 KCNT2Q6UVM3 1135 aa17.71■□□□□ 0.43
NOTCH3-201ENST00000263388 CREG2Q8IUH2 290 aa17.71■□□□□ 0.43
NOTCH3-201ENST00000263388 FUCA2Q9BTY2 467 aa17.71■□□□□ 0.43
NOTCH3-201ENST00000263388 PCYOX1Q9UHG3 505 aa17.71■□□□□ 0.43
NOTCH3-201ENST00000263388 ABRAXAS1Q6UWZ7 409 aa17.71■□□□□ 0.43
NOTCH3-201ENST00000263388 AMER2Q8N7J2 671 aa17.71■□□□□ 0.43
NOTCH3-201ENST00000263388 QRFPRQ96P65 431 aa17.71■□□□□ 0.43
NOTCH3-201ENST00000263388 FGFR1P11362 822 aa17.71■□□□□ 0.42
NOTCH3-201ENST00000263388 GSTM5P46439 218 aa17.71■□□□□ 0.42
NOTCH3-201ENST00000263388 MFSD7Q6UXD7 560 aa17.71■□□□□ 0.42
NOTCH3-201ENST00000263388 UBE2E3Q969T4 207 aa17.71■□□□□ 0.42
NOTCH3-201ENST00000263388 NUDT5Q9UKK9 219 aa17.71■□□□□ 0.42
NOTCH3-201ENST00000263388 POLR1DQ9Y2S0 133 aa17.71■□□□□ 0.42
NOTCH3-201ENST00000263388 CRYL1Q9Y2S2 319 aa17.71■□□□□ 0.42
NOTCH3-201ENST00000263388 TRIP11Q15643 1979 aa17.71■□□□□ 0.42
NOTCH3-201ENST00000263388 VAPBO95292 243 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 ACOX1Q15067 660 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 CYP2R1Q6VVX0 501 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 PTCD3Q96EY7 689 aaKnown RBP17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 SYT15Q9BQS2 421 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 POLR1BQ9H9Y6 1135 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 SPON1Q9HCB6 807 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 MORF4L1Q9UBU8 362 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 SNX6Q9UNH7 406 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 A0A1W2PRG6 482 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 CARNS1A5YM72 827 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 ARHGDIBP52566 201 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 EDEM1Q92611 657 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 GPATCH2LQ9NWQ4 482 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 CLN6Q9NWW5 311 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 GSSP48637 474 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 MRPS22P82650 360 aaKnown RBP17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 SNX32Q86XE0 403 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 ZNF671Q8TAW3 534 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 GNPTGQ9UJJ9 305 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 SHROOM3Q8TF72 1996 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 CYP7B1O75881 506 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 FGFR3P22607 806 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 RPL3P39023 403 aaKnown RBP17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 IFI35P80217 286 aaPredicted RBP17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 DSG4Q86SJ6 1040 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 FAM83AQ86UY5 434 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 CCDC185Q8N715 623 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 TDRKHQ9Y2W6 561 aaKnown RBP17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 RARAP10276 462 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 SLC6A3Q01959 620 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 PAN2Q504Q3 1202 aaKnown RBP17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 ZKSCAN4Q969J2 545 aaPredicted RBP17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 LENG9Q96B70 501 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 POLR1EQ9GZS1 481 aaKnown RBP17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 COQ6Q9Y2Z9 468 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 TFRCP02786 760 aaKnown RBP17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 FAM153BP0C7A2 387 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 PECAM1P16284 738 aaPredicted RBP17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 NPR3P17342 541 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 TYMPP19971 482 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 SQLEQ14534 574 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 FAM153CQ494X1 144 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 ZNF557Q8N988 423 aaPredicted RBP17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 FKBP14Q9NWM8 211 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 MTA2O94776 668 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 HIRAP54198 1017 aaPredicted RBP17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 SEC23AQ15436 765 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 ARCQ7LC44 396 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 TATDN2Q93075 761 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 KCND1Q9NSA2 647 aa17.7■□□□□ 0.42
NOTCH3-201ENST00000263388 ZNF549Q6P9A3 640 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 C8orf4Q9NR00 106 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 PCDHB5Q9Y5E4 795 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 CLUHO75153 1309 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 KPNA5O15131 536 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 SSNA1O43805 119 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 STARP49675 285 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 TNK2Q07912 1038 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 TMEM119Q4V9L6 283 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 OR52L1Q8NGH7 329 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 HASPINQ8TF76 798 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 SPATA5L1Q9BVQ7 753 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 DGCR6LQ9BY27 220 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 GRIP2Q9C0E4 1043 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 KIAA1683Q9H0B3 1180 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 CDHR5Q9HBB8 845 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 PSME2Q9UL46 239 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 S100A6P06703 90 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 PFKFB4Q16877 469 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 RNF43Q68DV7 783 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 BHLHB9Q6PI77 547 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 CRELD2Q6UXH1 353 aaPredicted RBP17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 POMGNT2Q8NAT1 580 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 STAG3L4Q8TBR4 150 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 ACMSDQ8TDX5 336 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 ZNF112Q9UJU3 913 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 ATXN2Q99700 1313 aaKnown RBP17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 UBE2QL1A1L167 161 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 WEE1P30291 646 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 GPR1P46091 355 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 NTRK3Q16288 839 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 BROXQ5VW32 411 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 ZSWIM2Q8NEG5 633 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms