RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 TMPRSS15P98073 1019 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 ZNF177Q13360 481 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 ZKSCAN8Q15776 578 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 ZDHHC20Q5W0Z9 365 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 COLGALT1Q8NBJ5 622 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 ASPSCR1Q9BZE9 553 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 POLR1EQ9GZS1 481 aaKnown RBP8.38□□□□□ -1.07
PTPN3-201ENST00000262539 CDH19Q9H159 772 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 SCML2Q9UQR0 700 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 HES2Q9Y543 173 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 CCT8L1PA6NM43 557 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 PRKCHP24723 683 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 PSMD5Q16401 504 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 KBTBD12Q3ZCT8 623 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 TIGD5Q53EQ6 642 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 WDTC1Q8N5D0 677 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 PHIPQ8WWQ0 1821 aa8.38□□□□□ -1.07
PTPN3-201ENST00000262539 CCDC195A0A1B0GUA6 201 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 QSOX1O00391 747 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 HIST1H2AGP0C0S8 130 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-201ENST00000262539 HIST1H2ADP20671 130 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 CLCN5P51795 746 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 MAP3K7CLP57077 242 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 RAB41Q5JT25 222 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 STON2Q8WXE9 905 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 HIST1H2AHQ96KK5 128 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 HIST1H2AJQ99878 128 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 H2AFJQ9BTM1 129 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 MRM3Q9HC36 420 aaKnown RBP8.37□□□□□ -1.07
PTPN3-201ENST00000262539 TLR6Q9Y2C9 796 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 MYO1CO00159 1063 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 XYLBO75191 536 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 RALBP11234 206 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 EEF1DP29692 281 aaKnown RBP8.37□□□□□ -1.07
PTPN3-201ENST00000262539 HNRNPH2P55795 449 aaKnown RBP8.37□□□□□ -1.07
PTPN3-201ENST00000262539 PPIGQ13427 754 aaKnown RBP eCLIP8.37□□□□□ -1.073e-7■■■■■ 28.4
PTPN3-201ENST00000262539 SMTNL2Q2TAL5 461 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 C10orf120Q5SQS8 335 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 DCAF12L1Q5VU92 463 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 FAM171A1Q5VUB5 890 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 TIFABQ6ZNK6 161 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 PRR23CQ6ZRP0 262 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 CMTR2Q8IYT2 770 aaKnown RBP8.37□□□□□ -1.07
PTPN3-201ENST00000262539 C10orf53Q8N6V4 93 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 NAT8LQ8N9F0 302 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 GLOD4Q9HC38 313 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 GIMAP4Q9NUV9 329 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 FZD10Q9ULW2 581 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 CSDE1O75534 798 aaKnown RBP8.37□□□□□ -1.07
PTPN3-201ENST00000262539 CORO7P57737 925 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 NCALDP61601 193 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 IL10RBQ08334 325 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 C1orf53Q5VUE5 145 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 FAM171BQ6P995 826 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 PIWIL4Q7Z3Z4 852 aaKnown RBP8.37□□□□□ -1.07
PTPN3-201ENST00000262539 TBC1D1Q86TI0 1168 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-201ENST00000262539 OLIG1Q8TAK6 271 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 ABI2Q9NYB9 513 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-201ENST00000262539 USP3Q9Y6I4 520 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 MYH4Q9Y623 1939 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 H0YGN5 161 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 ERVK-10P10266 1014 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 RAP1GDS1P52306 607 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 LRRC74AQ0VAA2 488 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 CRY1Q16526 586 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 PRAMEF19Q5SWL8 479 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 FUT10Q6P4F1 479 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 E2F7Q96AV8 911 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 P2RY11Q96G91 374 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 PCED1BQ96HM7 432 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 DNMT3LQ9UJW3 386 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-201ENST00000262539 NFS1Q9Y697 457 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 SLC7A4O43246 635 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 GRAP2O75791 330 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 SERPINE1P05121 402 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 KITP10721 976 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 AP1S1P61966 158 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 STX3Q13277 289 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 FAM83EQ2M2I3 478 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 UGT3A1Q6NUS8 523 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 PSRC1Q6PGN9 363 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-201ENST00000262539 CERS6Q6ZMG9 384 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 SIX5Q8N196 739 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 STX19Q8N4C7 294 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 SLC43A3Q8NBI5 491 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 PIP4K2CQ8TBX8 421 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 ZMAT2Q96NC0 199 aaKnown RBP8.37□□□□□ -1.07
PTPN3-201ENST00000262539 SERPINI1Q99574 410 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 MATN3O15232 486 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 JCHAINP01591 159 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 YY1P25490 414 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 TUBP50607 506 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 LRRC23Q53EV4 343 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-201ENST00000262539 ERAP2Q6P179 960 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 PPP1R14AQ96A00 147 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 C7orf26Q96N11 449 aa8.37□□□□□ -1.07
PTPN3-201ENST00000262539 MMADHCQ9H3L0 296 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-201ENST00000262539 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.37□□□□□ -1.07
PTPN3-201ENST00000262539 CAPN7Q9Y6W3 813 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms