RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 VN1R3Q9BXE9 311 aa14.77□□□□□ -0.05
FOXF1-201ENST00000262426 PLAC1Q9HBJ0 212 aa14.77□□□□□ -0.05
FOXF1-201ENST00000262426 TTC24A2A3L6 582 aaPredicted RBP14.76□□□□□ -0.05
FOXF1-201ENST00000262426 WDR27A2RRH5 827 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 INPPL1O15357 1258 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 MFSD5Q6N075 450 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 KIAA1841Q6NSI8 718 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 SPATA24Q86W54 205 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 SPATA16Q9BXB7 569 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 SF3B1O75533 1304 aaKnown RBP eCLIP14.76□□□□□ -0.05
FOXF1-201ENST00000262426 REV3LO60673 3130 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 CEP290O15078 2479 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 A0A0A0MRY4 1105 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 LYNP07948 512 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 BMPR2Q13873 1038 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 PPP2R5DQ14738 602 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 TNFAIP8L3Q5GJ75 292 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 C10orf120Q5SQS8 335 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 ZNF354CQ86Y25 554 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 RELL1Q8IUW5 271 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 CLPTM1LQ96KA5 538 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 SPATA13Q96N96 652 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 SMYD2Q9NRG4 433 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 HEMK1Q9Y5R4 338 aaPredicted RBP14.76□□□□□ -0.05
FOXF1-201ENST00000262426 NLRC5Q86WI3 1866 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 TRDMT1O14717 391 aaKnown RBP14.76□□□□□ -0.05
FOXF1-201ENST00000262426 CHADO15335 359 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 GCATO75600 419 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 F9P00740 461 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 PAX3P23760 479 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 MGAT1P26572 445 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 COG7P83436 770 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 PDK1Q15118 436 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 NFE2Q16621 373 aaPredicted RBP14.76□□□□□ -0.05
FOXF1-201ENST00000262426 CRIPAKQ8N1N5 446 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 SPATA22Q8NHS9 363 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 SLC7A6OSQ96CW6 309 aaPredicted RBP14.76□□□□□ -0.05
FOXF1-201ENST00000262426 RTP4Q96DX8 246 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 ZNF419Q96HQ0 510 aaPredicted RBP14.76□□□□□ -0.05
FOXF1-201ENST00000262426 TTPALQ9BTX7 342 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 ZFP69BQ9UJL9 534 aa14.76□□□□□ -0.05
FOXF1-201ENST00000262426 DNAJC6O75061 913 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 CNTN5O94779 1100 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 KRT4P19013 534 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 PTPN3P26045 913 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 CCR1P32246 355 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 PRMT2P55345 433 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 RNF168Q8IYW5 571 aaPredicted RBP14.75□□□□□ -0.05
FOXF1-201ENST00000262426 FBXO22Q8NEZ5 403 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 OR52K1Q8NGK4 314 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 NTAN1Q96AB6 310 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 MYEOVQ96EZ4 313 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 TTC25Q96NG3 672 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 MIPEPQ99797 713 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 ATXN3LQ9H3M9 355 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 TRABDQ9H4I3 376 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 ZNF180Q9UJW8 692 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 HS3ST4Q9Y661 456 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 E2F8A0AVK6 867 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 E7ESA3 106 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 GMPRP36959 345 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 ZBTB16Q05516 673 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 LRRC26Q2I0M4 334 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 SLC9A7Q96T83 725 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 ARMCX1Q9P291 453 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 PHTF1Q9UMS5 762 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 MYOCOSA0A1B0GUC4 107 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 FGFR3P22607 806 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 YWHAQP27348 245 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 RPA3P35244 121 aaPredicted RBP14.75□□□□□ -0.05
FOXF1-201ENST00000262426 GEMIN4P57678 1058 aaKnown RBP14.75□□□□□ -0.05
FOXF1-201ENST00000262426 PAFAH1B3Q15102 231 aaKnown RBP14.75□□□□□ -0.05
FOXF1-201ENST00000262426 DUS1LQ6P1R4 473 aaKnown RBP14.75□□□□□ -0.05
FOXF1-201ENST00000262426 PTPRN2Q92932 1015 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 PGAP3Q96FM1 320 aaPredicted RBP14.75□□□□□ -0.05
FOXF1-201ENST00000262426 EURLQ9NYK6 297 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 NUMBLQ9Y6R0 609 aa14.75□□□□□ -0.05
FOXF1-201ENST00000262426 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.75□□□□□ -0.05
FOXF1-201ENST00000262426 GOLGA8TH3BQL2 631 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 TMEM189-UBE2V1I3L0A0 370 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 SYN3O14994 580 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 MT-CYBP00156 380 aaPredicted RBP14.74□□□□□ -0.05
FOXF1-201ENST00000262426 T-ENOLP0DO92 83 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 ATF6P18850 670 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 CCR3P51677 355 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 KCNQ1P51787 676 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 PRKD1Q15139 912 aaPredicted RBP14.74□□□□□ -0.05
FOXF1-201ENST00000262426 PABPC1LQ4VXU2 614 aaKnown RBP14.74□□□□□ -0.05
FOXF1-201ENST00000262426 PIK3R6Q5UE93 754 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 UNC5AQ6ZN44 842 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 CFAP52Q8N1V2 620 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 IRGQQ8WZA9 623 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 FAM161BQ96MY7 647 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 FOXP3Q9BZS1 431 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 DCLRE1BQ9H816 532 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 CHD9Q3L8U1 2897 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 SLC12A8A0AV02 714 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 ATP9BO43861 1147 aa14.74□□□□□ -0.05
FOXF1-201ENST00000262426 TOP3BO95985 862 aaKnown RBP14.74□□□□□ -0.05
FOXF1-201ENST00000262426 ATP6V1B1P15313 513 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms