RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 GATA5Q9BWX5 397 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-201ENST00000261646 REXO4Q9GZR2 422 aaKnown RBP16.45■□□□□ 0.22
SREBF1-201ENST00000261646 CDHR5Q9HBB8 845 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 PIN4Q9Y237 131 aaKnown RBP16.45■□□□□ 0.22
SREBF1-201ENST00000261646 MRPL42Q9Y6G3 142 aaKnown RBP16.45■□□□□ 0.22
SREBF1-201ENST00000261646 BCL9LQ86UU0 1499 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 KCNU1A8MYU2 1149 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 PEX10O60683 326 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 C4BPAP04003 597 aaKnown RBP16.45■□□□□ 0.22
SREBF1-201ENST00000261646 CKMT2P17540 419 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 ALOX12P18054 663 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 JAG1P78504 1218 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 ANKRD23Q86SG2 305 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 HORMAD1Q86X24 394 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 DEFB106AQ8N104 65 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 AHI1Q8N157 1196 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 CBR4Q8N4T8 237 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 CPB2Q96IY4 423 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 PCDH18Q9HCL0 1135 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 ZNF358Q9NW07 568 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 UBIAD1Q9Y5Z9 338 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 VAC14Q08AM6 782 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 LSM12Q3MHD2 195 aaKnown RBP16.45■□□□□ 0.22
SREBF1-201ENST00000261646 PLEKHG4Q58EX7 1191 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 ZNF772Q68DY9 489 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-201ENST00000261646 GALNT18Q6P9A2 607 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 OR8H2Q8N162 312 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 PPP1R10Q96QC0 940 aaKnown RBP16.45■□□□□ 0.22
SREBF1-201ENST00000261646 GPATCH1Q9BRR8 931 aaKnown RBP16.45■□□□□ 0.22
SREBF1-201ENST00000261646 APOBEC3GQ9HC16 384 aaKnown RBP16.45■□□□□ 0.22
SREBF1-201ENST00000261646 VPS45Q9NRW7 570 aa16.45■□□□□ 0.22
SREBF1-201ENST00000261646 DYTNA2CJ06 578 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 PAPSS1O43252 624 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-201ENST00000261646 BNIP3LO60238 219 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 CABYRO75952 493 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 AMHP03971 560 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 PCNAP12004 261 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 GEMP55040 296 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 DPYSQ14117 519 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 SIX1Q15475 284 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-201ENST00000261646 CARTPTQ16568 116 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 OR52E8Q6IFG1 317 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 PRMT9Q6P2P2 845 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 DNAJC14Q6Y2X3 702 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-201ENST00000261646 SLC22A9Q8IVM8 553 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 GPR88Q9GZN0 384 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 PORCNQ9H237 461 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 MAP3K20Q9NYL2 800 aaKnown RBP16.44■□□□□ 0.22
SREBF1-201ENST00000261646 KLK14Q9P0G3 267 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 LIMD1Q9UGP4 676 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 ANKRD6Q9Y2G4 727 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 ZNF536O15090 1300 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 SCN11AQ9UI33 1791 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 SNED1Q8TER0 1413 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 TOP3BO95985 862 aaKnown RBP16.44■□□□□ 0.22
SREBF1-201ENST00000261646 ITGAXP20702 1163 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 TATDN1Q6P1N9 297 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 PIWIL4Q7Z3Z4 852 aaKnown RBP16.44■□□□□ 0.22
SREBF1-201ENST00000261646 SYTL1Q8IYJ3 562 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 C8orf59Q8N0T1 100 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-201ENST00000261646 PHTF2Q8N3S3 785 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 BLOC1S5Q8TDH9 187 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 NRG4Q8WWG1 115 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 BORCS6Q96GS4 357 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 RNF112Q9ULX5 631 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 SNAP91O60641 907 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 IMPDH2P12268 514 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 NPY2RP49146 381 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 TGFB2P61812 414 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 PSTKQ8IV42 348 aaKnown RBP16.44■□□□□ 0.22
SREBF1-201ENST00000261646 OFCC1Q8IZS5 231 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 PPP1R13LQ8WUF5 828 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 HERPUD2Q9BSE4 406 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 TEKT2Q9UIF3 430 aa16.44■□□□□ 0.22
SREBF1-201ENST00000261646 IGKV6D-41A0A0C4DH26 115 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 LACTBL1A8MY62 500 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 ERBB2P04626 1255 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 HSMCR30P0CW71 290 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 GOT1P17174 413 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 BACE1P56817 501 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 EFL1Q7Z2Z2 1120 aaKnown RBP16.43■□□□□ 0.22
SREBF1-201ENST00000261646 PSMA8Q8TAA3 256 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 COL20A1Q9P218 1284 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 ADAM28Q9UKQ2 775 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 HACD1B0YJ81 288 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 HBP1O60381 514 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 SOAT2O75908 522 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 TOMM70O94826 608 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 MT-ND1P03886 318 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 CHRM3P20309 590 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 GSSP48637 474 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 MAP3K10Q02779 954 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 TMEM198Q66K66 360 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 ERI1Q8IV48 349 aaKnown RBP16.43■□□□□ 0.22
SREBF1-201ENST00000261646 LMO3Q8TAP4 145 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 ZBED2Q9BTP6 218 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 PCDHAC1Q9H158 963 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 EPS8L2Q9H6S3 715 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 SLC17A6Q9P2U8 582 aa16.43■□□□□ 0.22
SREBF1-201ENST00000261646 DUOX1Q9NRD9 1551 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms