RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 BTBD7Q9P203 1132 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 AP4S1Q9Y587 144 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 TRIM43BA6NCK2 446 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 PSTKQ8IV42 348 aaKnown RBP18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 CDK20Q8IZL9 346 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 LZTR1Q8N653 840 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 ACO2Q99798 780 aaKnown RBP18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 PDP2Q9P2J9 529 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 DPP7Q9UHL4 492 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 ST3GAL5Q9UNP4 418 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 INVSQ9Y283 1065 aa18.95■□□□□ 0.62
SMARCC1-201ENST00000254480 KANSL1LA0AUZ9 987 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 CRATP43155 626 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 BRCC3P46736 316 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 ZNF697Q5TEC3 545 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 TTC7BQ86TV6 843 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 RCCD1A6NED2 376 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 CHKAP35790 457 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 MRPS22P82650 360 aaKnown RBP18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 RAET1GQ6H3X3 334 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 RNF44Q7L0R7 432 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 FAM124AQ86V42 546 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 KATNAL2Q8IYT4 538 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 FAM9CQ8IZT9 166 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 CFAP52Q8N1V2 620 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 NDRG1Q92597 394 aaKnown RBP18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 ZCCHC2Q9C0B9 1178 aaKnown RBP18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 HDHD2Q9H0R4 259 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 THOP1P52888 689 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 IL2P60568 153 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 PARP6Q2NL67 630 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 EEF1DP3Q658K8 133 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 EID3Q8N140 333 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 ZCCHC9Q8N567 271 aaKnown RBP18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 POMGNT2Q8NAT1 580 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.94■□□□□ 0.622e-6■■■□□ 14.7
SMARCC1-201ENST00000254480 POLR1DQ9Y2S0 133 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 SIGLEC16A6NMB1 481 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 RPLP2P05387 115 aaKnown RBP18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 CYP3A4P08684 503 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 NAGLUP54802 743 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 GPR156Q8NFN8 814 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 RNFT2Q96EX2 444 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 GDF3Q9NR23 364 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 YDJCA8MPS7 323 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 CCNB1P14635 433 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 S100A3P33764 101 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 MFSD1Q9H3U5 465 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 AVENQ9NQS1 362 aaPredicted RBP18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 SYBUQ9NX95 663 aa18.94■□□□□ 0.62
SMARCC1-201ENST00000254480 WNT7AO00755 349 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 IL1BP01584 269 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 RAD23AP54725 363 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 SELENOMQ8WWX9 145 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 ACSS2Q9NR19 701 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 HACD1B0YJ81 288 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 ATP5BP06576 529 aaKnown RBP18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 PPIL2Q13356 520 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 MIIPQ5JXC2 388 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 HECTD3Q5T447 861 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 CASP12Q6UXS9 341 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 USP50Q70EL3 339 aaPredicted RBP18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 PLK2Q9NYY3 685 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 KRT75O95678 551 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 CAPN1P07384 714 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 POLD2P49005 469 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 TARBP2Q15633 366 aaKnown RBP18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 TMPRSS6Q8IU80 811 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 TMEM86AQ8N2M4 240 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 MRPL45Q9BRJ2 306 aaKnown RBP18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 MLPHQ9BV36 600 aaPredicted RBP18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 SOHLH2Q9NX45 425 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 DNMT3LQ9UJW3 386 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 CHKBQ9Y259 395 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 FRMPD1Q5SYB0 1578 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 LRPAP1P30533 357 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 ABRQ12979 859 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 CTBP1Q13363 440 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 SEMA3CQ99985 751 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 NXF3Q9H4D5 531 aaKnown RBP18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 DDX18Q9NVP1 670 aaKnown RBP18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 NUP107P57740 925 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 ACSM2AQ08AH3 577 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 ACSM2BQ68CK6 577 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 ZCCHC8Q6NZY4 707 aaKnown RBP18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 PANX3Q96QZ0 392 aa18.93■□□□□ 0.62
SMARCC1-201ENST00000254480 ZNF839A8K0R7 811 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 RGS14O43566 566 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 RPL22P35268 128 aaKnown RBP18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 FAM45BPQ6NSW5 357 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 CXorf40AQ8TE69 158 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 ZNF558Q96NG5 402 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 FAM126AQ9BYI3 521 aaPredicted RBP18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 MKL2Q9ULH7 1088 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 LYVE1Q9Y5Y7 322 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 USP32Q8NFA0 1604 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 ANKDD1BA6NHY2 528 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 NOMO2Q5JPE7 1267 aa18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 PPP1R26Q5T8A7 1209 aaPredicted RBP18.92■□□□□ 0.62
SMARCC1-201ENST00000254480 TMEM132CQ8N3T6 1108 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms