RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 ZFXP17010 805 aaPredicted RBP11.87□□□□□ -0.51
LIN28A-201ENST00000254231 GARSP41250 739 aaKnown RBP11.87□□□□□ -0.51
LIN28A-201ENST00000254231 ABL2P42684 1182 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 ACAP1Q15027 740 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 CNGA3Q16281 694 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 PABPC1LQ4VXU2 614 aaKnown RBP11.87□□□□□ -0.51
LIN28A-201ENST00000254231 FOXR1Q6PIV2 292 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 RHBDF2Q6PJF5 856 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 ITFG1Q8TB96 612 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 HNRNPLLQ8WVV9 542 aaKnown RBP11.87□□□□□ -0.51
LIN28A-201ENST00000254231 PRCCQ92733 491 aaPredicted RBP11.87□□□□□ -0.51
LIN28A-201ENST00000254231 ALKBH8Q96BT7 664 aaKnown RBP11.87□□□□□ -0.51
LIN28A-201ENST00000254231 RNF31Q96EP0 1072 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 FUBP3Q96I24 572 aaKnown RBP eCLIP11.87□□□□□ -0.51
LIN28A-201ENST00000254231 XPO6Q96QU8 1125 aaKnown RBP11.87□□□□□ -0.51
LIN28A-201ENST00000254231 TSPYL1Q9H0U9 437 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 INTS9Q9NV88 658 aaKnown RBP11.87□□□□□ -0.51
LIN28A-201ENST00000254231 ZFATQ9P243 1243 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 AGO1Q9UL18 857 aaKnown RBP11.87□□□□□ -0.51
LIN28A-201ENST00000254231 SCML2Q9UQR0 700 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 DMDP11532 3685 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 STX2P32856 288 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 CCT5P48643 541 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 TMEM31Q5JXX7 168 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 RNASEH2BQ5TBB1 312 aaKnown RBP11.87□□□□□ -0.51
LIN28A-201ENST00000254231 LPCAT1Q8NF37 534 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 KCNN1Q92952 543 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 ATP6V1G3Q96LB4 118 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 SLC46A2Q9BY10 475 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 IARS2Q9NSE4 1012 aaKnown RBP11.87□□□□□ -0.51
LIN28A-201ENST00000254231 CES2O00748 559 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 STC2O76061 302 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 RHOP08100 348 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 MX2P20592 715 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 TGM2P21980 687 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 PPM1AP35813 382 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 SEC13P55735 322 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 SARNPP82979 210 aaKnown RBP11.87□□□□□ -0.51
LIN28A-201ENST00000254231 KDSRQ06136 332 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 PRPSAP1Q14558 356 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 RAB41Q5JT25 222 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 TMEM25Q86YD3 366 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 IQCKQ8N0W5 287 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 FAM71BQ8TC56 605 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 WFDC5Q8TCV5 224 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 SPOCK2Q92563 424 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 BTN2A3PQ96KV6 586 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 ABCB8Q9NUT2 735 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 SLC2A6Q9UGQ3 507 aa11.87□□□□□ -0.51
LIN28A-201ENST00000254231 A0A0A0MRY4 1105 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 PLK4O00444 970 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 LINC01565O15544 149 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 MT-ND3P03897 115 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 HLA-DQB2P05538 268 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 OXCT1P55809 520 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 OVGP1Q12889 678 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 ZNF460Q14592 562 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 DLG2Q15700 870 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 SLC5A9Q2M3M2 681 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 PM20D1Q6GTS8 502 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 BZW1Q7L1Q6 419 aaKnown RBP11.86□□□□□ -0.51
LIN28A-201ENST00000254231 CMC1Q7Z7K0 106 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 CNTD1Q8N815 330 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 SPATA13Q96N96 652 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 NDNQ99608 321 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 LSM7Q9UK45 103 aaKnown RBP11.86□□□□□ -0.51
LIN28A-201ENST00000254231 YBX2Q9Y2T7 364 aaKnown RBP11.86□□□□□ -0.51
LIN28A-201ENST00000254231 PCDHB9Q9Y5E1 797 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 TMEM120BA0PK00 339 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 TRIM49D1C9J1S8 452 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 NEMP1O14524 444 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 ACSL4O60488 711 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 PRSS56P0CW18 603 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 HLA-EP13747 358 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 CHN1P15882 459 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 DSG1Q02413 1049 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 WASHC5Q12768 1159 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 NADSYN1Q6IA69 706 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 PSRC1Q6PGN9 363 aaPredicted RBP11.86□□□□□ -0.51
LIN28A-201ENST00000254231 SPPL3Q8TCT6 385 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 NKD2Q969F2 451 aaPredicted RBP11.86□□□□□ -0.51
LIN28A-201ENST00000254231 STAMBPL1Q96FJ0 436 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 C8orf48Q96LL4 319 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 PAFAH2Q99487 392 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 WHRNQ9P202 907 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 EVLQ9UI08 416 aaPredicted RBP11.86□□□□□ -0.51
LIN28A-201ENST00000254231 SLCO3A1Q9UIG8 710 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 USP3Q9Y6I4 520 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 SEC16AO15027 2179 aa11.86□□□□□ -0.51
LIN28A-201ENST00000254231 HMGA1P17096 107 aaKnown RBP11.85□□□□□ -0.51
LIN28A-201ENST00000254231 HSPA9P38646 679 aaKnown RBP11.85□□□□□ -0.51
LIN28A-201ENST00000254231 SOX9P48436 509 aa11.85□□□□□ -0.51
LIN28A-201ENST00000254231 C2orf27AQ580R0 203 aa11.85□□□□□ -0.51
LIN28A-201ENST00000254231 HHATQ5VTY9 493 aa11.85□□□□□ -0.51
LIN28A-201ENST00000254231 SLC8B1Q6J4K2 584 aa11.85□□□□□ -0.51
LIN28A-201ENST00000254231 ZSCAN18Q8TBC5 510 aaPredicted RBP11.85□□□□□ -0.51
LIN28A-201ENST00000254231 OXNAD1Q96HP4 312 aaPredicted RBP11.85□□□□□ -0.51
LIN28A-201ENST00000254231 CINPQ9BW66 212 aaPredicted RBP11.85□□□□□ -0.51
LIN28A-201ENST00000254231 SMOC2Q9H3U7 446 aa11.85□□□□□ -0.51
LIN28A-201ENST00000254231 NKIRAS1Q9NYS0 192 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms