RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 MYO1AQ9UBC5 1043 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 SUSD2Q9UGT4 822 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 PPM1HQ9ULR3 514 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 ACTL7AQ9Y615 435 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 PCDH15Q96QU1 1955 aa23.48■■□□□ 1.35
LSM4-201ENST00000252816 A0A087X0T9 212 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 MED19A0JLT2 244 aaPredicted RBP23.47■■□□□ 1.35
LSM4-201ENST00000252816 PLK4O00444 970 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 FAM228BP0C875 321 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 MYBL1P10243 752 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 GOT1P17174 413 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 DRD3P35462 400 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 GALCP54803 685 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 AIF1P55008 147 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 SFSWAPQ12872 951 aaKnown RBP23.47■■□□□ 1.35
LSM4-201ENST00000252816 OR2A12Q8NGT7 310 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 FNIP1Q8TF40 1166 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 ARHGEF2Q92974 986 aaKnown RBP23.47■■□□□ 1.35
LSM4-201ENST00000252816 TRIM11Q96F44 468 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 PEBP4Q96S96 227 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 GPATCH2LQ9NWQ4 482 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 ARHGAP20Q9P2F6 1191 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 FZD4Q9ULV1 537 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.47■■□□□ 1.353e-6■■■□□ 18.4
LSM4-201ENST00000252816 CACNA1EQ15878 2313 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 NCOR2Q9Y618 2525 aa23.47■■□□□ 1.35
LSM4-201ENST00000252816 A0A1B0GTW7 788 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 FAM47DPA6NHR8 397 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 ALOX15BO15296 676 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 BCAT2O15382 392 aaPredicted RBP23.46■■□□□ 1.35
LSM4-201ENST00000252816 CREB3O43889 395 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 ZNF821O75541 412 aaPredicted RBP23.46■■□□□ 1.35
LSM4-201ENST00000252816 FSBPO95073 299 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 CD160O95971 181 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 CTSLP07711 333 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 EPHB2P29323 1055 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 SERPINH1P50454 418 aaKnown RBP23.46■■□□□ 1.35
LSM4-201ENST00000252816 CLCN6P51797 869 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 POM121L1PQ3SYA9 428 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 RETSATQ6NUM9 610 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 C22orf39Q6P5X5 142 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 NCEH1Q6PIU2 408 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 DSG4Q86SJ6 1040 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 RTL3Q8N8U3 475 aaKnown RBP23.46■■□□□ 1.35
LSM4-201ENST00000252816 OR2I1PQ8NGU4 316 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 GTPBP2Q9BX10 602 aaKnown RBP23.46■■□□□ 1.35
LSM4-201ENST00000252816 TNKS2Q9H2K2 1166 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 NOL6Q9H6R4 1146 aaKnown RBP23.46■■□□□ 1.35
LSM4-201ENST00000252816 SCINQ9Y6U3 715 aa23.46■■□□□ 1.35
LSM4-201ENST00000252816 ADAMTS9Q9P2N4 1935 aa23.45■■□□□ 1.35
LSM4-201ENST00000252816 C10orf142B7Z368 130 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 ARHGAP33O14559 1287 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 CBFA2T2O43439 604 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 RAMP2O60895 175 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 IGHV4-34P06331 123 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 DESP17661 470 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 HNRNPH3P31942 346 aaKnown RBP23.45■■□□□ 1.34
LSM4-201ENST00000252816 ADPRHP54922 357 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 CA9Q16790 459 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 KIAA0895LQ68EN5 471 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 SPECC1LQ69YQ0 1117 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 CYP4V2Q6ZWL3 525 aaPredicted RBP23.45■■□□□ 1.34
LSM4-201ENST00000252816 VPS36Q86VN1 386 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 CHST14Q8NCH0 376 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 PIP4K2CQ8TBX8 421 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 FAM131CQ96AQ9 280 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 EPAS1Q99814 870 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 ORAI3Q9BRQ5 295 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 MAGEH1Q9H213 219 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 PCSK1NQ9UHG2 260 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 CHD5Q8TDI0 1954 aa23.45■■□□□ 1.34
LSM4-201ENST00000252816 RNF103O00237 685 aa23.44■■□□□ 1.34
LSM4-201ENST00000252816 MIPP30301 263 aa23.44■■□□□ 1.34
LSM4-201ENST00000252816 ETFBP38117 255 aa23.44■■□□□ 1.34
LSM4-201ENST00000252816 SLC20A2Q08357 652 aa23.44■■□□□ 1.34
LSM4-201ENST00000252816 UAP1L1Q3KQV9 507 aa23.44■■□□□ 1.34
LSM4-201ENST00000252816 PPM1JQ5JR12 505 aa23.44■■□□□ 1.34
LSM4-201ENST00000252816 FAM46CQ5VWP2 391 aa23.44■■□□□ 1.34
LSM4-201ENST00000252816 DAB2IPQ5VWQ8 1189 aa23.44■■□□□ 1.34
LSM4-201ENST00000252816 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.44■■□□□ 1.34
LSM4-201ENST00000252816 OR2T34Q8NGX1 318 aa23.44■■□□□ 1.34
LSM4-201ENST00000252816 OR14C36Q8NHC7 312 aa23.44■■□□□ 1.34
LSM4-201ENST00000252816 THAP2Q9H0W7 228 aa23.44■■□□□ 1.34
LSM4-201ENST00000252816 MRPL47Q9HD33 250 aaKnown RBP23.44■■□□□ 1.34
LSM4-201ENST00000252816 AP4E1Q9UPM8 1137 aa23.44■■□□□ 1.34
LSM4-201ENST00000252816 FCF1Q9Y324 198 aaKnown RBP23.44■■□□□ 1.34
LSM4-201ENST00000252816 ASCC3Q8N3C0 2202 aaKnown RBP23.44■■□□□ 1.34
LSM4-201ENST00000252816 WASH4PA8MWX3 477 aa23.43■■□□□ 1.34
LSM4-201ENST00000252816 C1QTNF3-AMACRE9PGA6 284 aa23.43■■□□□ 1.34
LSM4-201ENST00000252816 LRCH4O75427 683 aa23.43■■□□□ 1.34
LSM4-201ENST00000252816 RNF8O76064 485 aa23.43■■□□□ 1.34
LSM4-201ENST00000252816 SYPP08247 313 aa23.43■■□□□ 1.34
LSM4-201ENST00000252816 CHRNA3P32297 505 aa23.43■■□□□ 1.34
LSM4-201ENST00000252816 ATXN3P54252 364 aaPredicted RBP23.43■■□□□ 1.34
LSM4-201ENST00000252816 FOXK2Q01167 660 aa23.43■■□□□ 1.34
LSM4-201ENST00000252816 BNC1Q01954 994 aa23.43■■□□□ 1.34
LSM4-201ENST00000252816 CNTN1Q12860 1018 aa23.43■■□□□ 1.34
LSM4-201ENST00000252816 GRIK2Q13002 908 aa23.43■■□□□ 1.34
LSM4-201ENST00000252816 POLD3Q15054 466 aaPredicted RBP23.43■■□□□ 1.34
LSM4-201ENST00000252816 DPY19L3Q6ZPD9 716 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms