RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 TEKT5Q96M29 485 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 FAM161BQ96MY7 647 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 XPO6Q96QU8 1125 aaKnown RBP13.21□□□□□ -0.29
LSM8-201ENST00000249299 FEM1AQ9BSK4 669 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 PARD6BQ9BYG5 372 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 LINC00597Q9H2U6 94 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 SP110Q9HB58 689 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 TRPV5Q9NQA5 729 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 SHOC2Q9UQ13 582 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 SLC27A6Q9Y2P4 619 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 WNT6Q9Y6F9 365 aa13.21□□□□□ -0.29
LSM8-201ENST00000249299 NUP210Q8TEM1 1887 aaPredicted RBP13.2□□□□□ -0.3
LSM8-201ENST00000249299 UQCRHLA0A096LP55 91 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 GOLGA6CA6NDK9 693 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 GOLGA6BA6NDN3 693 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 DNALI1O14645 258 aaPredicted RBP13.2□□□□□ -0.3
LSM8-201ENST00000249299 PSMD3O43242 534 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 ERLIN1O75477 346 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 UQCRHP07919 91 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 GOLGA6DP0CG33 693 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 ADH5P11766 374 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 TYRP14679 529 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 PTPN3P26045 913 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 EMP3P54852 163 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 GDF10P55107 478 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 SLC7A5Q01650 507 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 GPS1Q13098 491 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 ELF2Q15723 593 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 SLC14A2Q15849 920 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 RALGPS1Q5JS13 557 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 MARC1Q5VT66 337 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 RNF219Q5W0B1 726 aaPredicted RBP13.2□□□□□ -0.3
LSM8-201ENST00000249299 RETSATQ6NUM9 610 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 ARHGEF18Q6ZSZ5 1173 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 TPGS1Q6ZTW0 290 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 TP53INP2Q8IXH6 220 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 WFIKKN2Q8TEU8 576 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 ALG14Q96F25 216 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 GUCD1Q96NT3 240 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 TRMT61BQ9BVS5 477 aaKnown RBP13.2□□□□□ -0.3
LSM8-201ENST00000249299 PHF7Q9BWX1 381 aaPredicted RBP13.2□□□□□ -0.3
LSM8-201ENST00000249299 MUC3BQ9H195 1237 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 ECT2Q9H8V3 914 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 PDFQ9HBH1 243 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 ATP13A1Q9HD20 1204 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 EIF2B3Q9NR50 452 aaKnown RBP13.2□□□□□ -0.3
LSM8-201ENST00000249299 GOLGA6AQ9NYA3 693 aa13.2□□□□□ -0.3
LSM8-201ENST00000249299 TPX2Q9ULW0 747 aaKnown RBP13.2□□□□□ -0.3
LSM8-201ENST00000249299 HELZP42694 1942 aaKnown RBP13.19□□□□□ -0.3
LSM8-201ENST00000249299 A0A0D9SEW6 157 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 GRXCR2A6NFK2 248 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.19□□□□□ -0.3
LSM8-201ENST00000249299 NEDD8-MDP1E9PL57 170 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 AP3B1O00203 1094 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 DYNC1I1O14576 645 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 TIMM44O43615 452 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 ZMPSTE24O75844 475 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 MAP3K6O95382 1288 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 CYP17A1P05093 508 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 KCNA5P22460 613 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 RPL21P46778 160 aaKnown RBP13.19□□□□□ -0.3
LSM8-201ENST00000249299 SEMA5AQ13591 1074 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 HTR4Q13639 388 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 SMAD2Q15796 467 aaKnown RBP13.19□□□□□ -0.3
LSM8-201ENST00000249299 PLEKHG6Q3KR16 790 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 IL31Q6EBC2 164 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 ALG1LQ6GMV1 187 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 PPP1R21Q6ZMI0 780 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 PID1Q7Z2X4 250 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 SPNS2Q8IVW8 549 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 SUGP1Q8IWZ8 645 aaKnown RBP13.19□□□□□ -0.3
LSM8-201ENST00000249299 ETFBKMTQ8IXQ9 262 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 PPIL6Q8IXY8 311 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 ZNF567Q8N184 647 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 ART4Q93070 314 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 EXOC4Q96A65 974 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 PSKH2Q96QS6 385 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 TRIM51Q9BSJ1 452 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 GBA3Q9H227 469 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 ARGLU1Q9NWB6 273 aaPredicted RBP13.19□□□□□ -0.3
LSM8-201ENST00000249299 GRHL1Q9NZI5 618 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 MTRF1LQ9UGC7 380 aaKnown RBP13.19□□□□□ -0.3
LSM8-201ENST00000249299 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.19□□□□□ -0.3
LSM8-201ENST00000249299 SEPT3Q9UH03 358 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 CDH22Q9UJ99 828 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 VPS28Q9UK41 221 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 ATP8A1Q9Y2Q0 1164 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 AAR2Q9Y312 384 aaKnown RBP13.19□□□□□ -0.3
LSM8-201ENST00000249299 V9GYY5 206 aaPredicted RBP13.19□□□□□ -0.3
LSM8-201ENST00000249299 C2orf16Q68DN1 1984 aa13.19□□□□□ -0.3
LSM8-201ENST00000249299 DOCK6Q96HP0 2047 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 H3BQ06 376 aaPredicted RBP13.18□□□□□ -0.3
LSM8-201ENST00000249299 KCNK1O00180 336 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 NEBLO76041 1014 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 JCHAINP01591 159 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 ASLP04424 464 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 PABPC1P11940 636 aaKnown RBP13.18□□□□□ -0.3
LSM8-201ENST00000249299 ACVRL1P37023 503 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 CSKP41240 450 aa13.18□□□□□ -0.3
LSM8-201ENST00000249299 NSUN2Q08J23 767 aaKnown RBP eCLIP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms