RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 MT-CO1P00395 513 aa24.88■■□□□ 1.57
SDF2L1-201ENST00000248958 SLC8A1P32418 973 aa24.88■■□□□ 1.57
SDF2L1-201ENST00000248958 HCAR3P49019 387 aa24.88■■□□□ 1.57
SDF2L1-201ENST00000248958 ARF5P84085 180 aa24.88■■□□□ 1.57
SDF2L1-201ENST00000248958 WDR45BQ5MNZ6 344 aa24.88■■□□□ 1.57
SDF2L1-201ENST00000248958 FAM46CQ5VWP2 391 aa24.88■■□□□ 1.57
SDF2L1-201ENST00000248958 PEAR1Q5VY43 1037 aaPredicted RBP24.88■■□□□ 1.57
SDF2L1-201ENST00000248958 ARMCX6Q7L4S7 300 aa24.88■■□□□ 1.57
SDF2L1-201ENST00000248958 UMODL1-AS1Q8N2C9 162 aa24.88■■□□□ 1.57
SDF2L1-201ENST00000248958 TC2NQ8N9U0 490 aa24.88■■□□□ 1.57
SDF2L1-201ENST00000248958 GPR174Q9BXC1 333 aa24.88■■□□□ 1.57
SDF2L1-201ENST00000248958 GPATCH2LQ9NWQ4 482 aa24.88■■□□□ 1.57
SDF2L1-201ENST00000248958 FBXL12Q9NXK8 326 aa24.88■■□□□ 1.57
SDF2L1-201ENST00000248958 FZD4Q9ULV1 537 aa24.88■■□□□ 1.57
SDF2L1-201ENST00000248958 C1QTNF3-AMACRE9PGA6 284 aa24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 DAPK3O43293 454 aa24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 IL1BP01584 269 aa24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 VAV1P15498 845 aa24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 GLDCP23378 1020 aa24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 ACVRL1P37023 503 aa24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 RECQLP46063 649 aaPredicted RBP24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 HADHQ16836 314 aaKnown RBP24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 PARP15Q460N3 678 aa24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 Q6ZVU0 165 aa24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 CYP4V2Q6ZWL3 525 aaPredicted RBP24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 SLC41A1Q8IVJ1 513 aa24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 CEP76Q8TAP6 659 aa24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 GANCQ8TET4 914 aa24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 TEKT4Q8WW24 435 aa24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 HSPA12BQ96MM6 686 aa24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 ZWILCHQ9H900 591 aa24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 EVLQ9UI08 416 aaPredicted RBP24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 PILRBQ9UKJ0 227 aa24.87■■□□□ 1.57
SDF2L1-201ENST00000248958 KHNYNO15037 678 aaKnown RBP24.86■■□□□ 1.57
SDF2L1-201ENST00000248958 MID1O15344 667 aa24.86■■□□□ 1.57
SDF2L1-201ENST00000248958 KDELR3O43731 214 aa24.86■■□□□ 1.57
SDF2L1-201ENST00000248958 DPYSL2Q16555 572 aa24.86■■□□□ 1.57
SDF2L1-201ENST00000248958 CA9Q16790 459 aa24.86■■□□□ 1.57
SDF2L1-201ENST00000248958 C22orf39Q6P5X5 142 aa24.86■■□□□ 1.57
SDF2L1-201ENST00000248958 LINGO4Q6UY18 593 aa24.86■■□□□ 1.57
SDF2L1-201ENST00000248958 FAM124AQ86V42 546 aa24.86■■□□□ 1.57
SDF2L1-201ENST00000248958 DEFB119Q8N690 84 aa24.86■■□□□ 1.57
SDF2L1-201ENST00000248958 PCDH20Q8N6Y1 951 aaKnown RBP24.86■■□□□ 1.57
SDF2L1-201ENST00000248958 CASKIN2Q8WXE0 1202 aa24.86■■□□□ 1.57
SDF2L1-201ENST00000248958 KCTD15Q96SI1 283 aaPredicted RBP24.86■■□□□ 1.57
SDF2L1-201ENST00000248958 OMDQ99983 421 aa24.86■■□□□ 1.57
SDF2L1-201ENST00000248958 SUSD2Q9UGT4 822 aa24.86■■□□□ 1.57
SDF2L1-201ENST00000248958 INTUQ9ULD6 942 aa24.86■■□□□ 1.57
SDF2L1-201ENST00000248958 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.86■■□□□ 1.57
SDF2L1-201ENST00000248958 METTL12A8MUP2 240 aa24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 MEI4A8MW99 385 aa24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 GOT1P17174 413 aa24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 ITPKAP23677 461 aa24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 PSMD8P48556 350 aa24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 NDST2P52849 883 aa24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 CCDC6Q16204 474 aa24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 AASDHQ4L235 1098 aaPredicted RBP24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 PPP6R3Q5H9R7 873 aaPredicted RBP24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 RFX8Q6ZV50 586 aa24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 ZNF354CQ86Y25 554 aa24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 RGL4Q8IZJ4 473 aa24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 ISG20Q96AZ6 181 aaKnown RBP24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 BTBD6Q96KE9 485 aa24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 PACSIN1Q9BY11 444 aa24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 SPTLC3Q9NUV7 552 aa24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 PPM1HQ9ULR3 514 aa24.85■■□□□ 1.57
SDF2L1-201ENST00000248958 A0A1W2PP55 124 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 RASA4BC9J798 803 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 H3BRJ5 948 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 K7ERQ8 282 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 RASA4O43374 803 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 SMAD6O43541 496 aaKnown RBP24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 SEMA4FO95754 770 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 GNSP15586 552 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 IL1R2P27930 398 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 ACSL1P33121 698 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 ARL4AP40617 200 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 DUOXA1Q1HG43 343 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 RHOT2Q8IXI1 618 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 PLPP6Q8IY26 295 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 TMIEQ8NEW7 156 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 OR2A12Q8NGT7 310 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 NETO1Q8TDF5 533 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 DNASE2BQ8WZ79 361 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 NOL6Q9H6R4 1146 aaKnown RBP24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 GVINP1Q7Z2Y8 2422 aa24.84■■□□□ 1.57
SDF2L1-201ENST00000248958 SLC7A4O43246 635 aa24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 BNIP3LO60238 219 aa24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 RNASEH2AO75792 299 aaKnown RBP24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 PROSCO94903 275 aa24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 PRNPP04156 253 aa24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 RARAP10276 462 aa24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 ERCC2P18074 760 aa24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 CHRNA3P32297 505 aa24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 SLC25A11Q02978 314 aaKnown RBP24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 CCDC15Q0P6D6 951 aa24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 SF3A2Q15428 464 aaKnown RBP24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 KCNT1Q5JUK3 1230 aa24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 DCAF12L1Q5VU92 463 aa24.83■■□□□ 1.57
SDF2L1-201ENST00000248958 DAB2IPQ5VWQ8 1189 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms