RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 GLB1LQ6UWU2 654 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 ATG14Q6ZNE5 492 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 RTN4RL1Q86UN2 441 aaPredicted RBP16.46■□□□□ 0.22
UBE3D-201ENST00000237186 ARHGAP24Q8N264 748 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 AZIN2Q96A70 460 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 FUBP3Q96I24 572 aaKnown RBP eCLIP16.46■□□□□ 0.22
UBE3D-201ENST00000237186 VPS39Q96JC1 886 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 RILPQ96NA2 401 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 SERPINB11Q96P15 392 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 GPR22Q99680 433 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 TBL1YQ9BQ87 522 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 NMUR1Q9HB89 426 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 MRM3Q9HC36 420 aaKnown RBP16.46■□□□□ 0.22
UBE3D-201ENST00000237186 TRMT13Q9NUP7 481 aaKnown RBP16.46■□□□□ 0.22
UBE3D-201ENST00000237186 ZNF358Q9NW07 568 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 DNAJC28Q9NX36 388 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 UBP1Q9NZI7 540 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 SCML2Q9UQR0 700 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 PCDHB12Q9Y5F1 795 aa16.46■□□□□ 0.22
UBE3D-201ENST00000237186 B2RBV5 119 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 F8W810 466 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 ENTPD5O75356 428 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 ARRB2P32121 409 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 GCKP35557 465 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 MSANTD2Q6P1R3 559 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 RFWD3Q6PCD5 774 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 POTEHQ6S545 545 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 MON1AQ86VX9 555 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 RTL3Q8N8U3 475 aaKnown RBP16.45■□□□□ 0.22
UBE3D-201ENST00000237186 FATE1Q969F0 183 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 MCUR1Q96AQ8 359 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 SLC39A13Q96H72 371 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 ZNF419Q96HQ0 510 aaPredicted RBP16.45■□□□□ 0.22
UBE3D-201ENST00000237186 CAPNS2Q96L46 248 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 C8orf48Q96LL4 319 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 RHOJQ9H4E5 214 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 ENTPD7Q9NQZ7 604 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 IARS2Q9NSE4 1012 aaKnown RBP16.45■□□□□ 0.22
UBE3D-201ENST00000237186 SFMBT1Q9UHJ3 866 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 ANKRD6Q9Y2G4 727 aa16.45■□□□□ 0.22
UBE3D-201ENST00000237186 TMEM114B3SHH9 223 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 SPECC1L-ADORA2AF8WAN1 911 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 H2AFYO75367 372 aaKnown RBP16.44■□□□□ 0.22
UBE3D-201ENST00000237186 DDHD2O94830 711 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 KLHL2O95198 593 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 APOA4P06727 396 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 GEMP55040 296 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 CAP1Q01518 475 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 ITGA9Q13797 1035 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 NFE2Q16621 373 aaPredicted RBP16.44■□□□□ 0.22
UBE3D-201ENST00000237186 ANO4Q32M45 955 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 SLC24A5Q71RS6 500 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 ZC3HC1Q86WB0 502 aaKnown RBP16.44■□□□□ 0.22
UBE3D-201ENST00000237186 DCP1BQ8IZD4 617 aaKnown RBP16.44■□□□□ 0.22
UBE3D-201ENST00000237186 SPATA22Q8NHS9 363 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 TTC8Q8TAM2 541 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 IL37Q9NZH6 218 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 MID2Q9UJV3 735 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 APOBEC2Q9Y235 224 aaKnown RBP16.44■□□□□ 0.22
UBE3D-201ENST00000237186 NOD1Q9Y239 953 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 LRRC42Q9Y546 428 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 HS3ST4Q9Y661 456 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 A0A1W2PQH9 124 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 E9PAM4 449 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 B4GALT3O60512 393 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 SIN3BO75182 1162 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 ENO1P06733 434 aaKnown RBP16.44■□□□□ 0.22
UBE3D-201ENST00000237186 TUBP50607 506 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 SMAD1Q15797 465 aaKnown RBP16.44■□□□□ 0.22
UBE3D-201ENST00000237186 UGP2Q16851 508 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 DEFB115Q30KQ5 88 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 KHDC1Q4VXA5 237 aaKnown RBP16.44■□□□□ 0.22
UBE3D-201ENST00000237186 TRAF7Q6Q0C0 670 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 MAVSQ7Z434 540 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 ZNF280BQ86YH2 543 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 COLGALT2Q8IYK4 626 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 NUP93Q8N1F7 819 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 RBM15BQ8NDT2 890 aaKnown RBP16.44■□□□□ 0.22
UBE3D-201ENST00000237186 RDH11Q8TC12 318 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 USP33Q8TEY7 942 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 YY1AP1Q9H869 796 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 NMRAL1Q9HBL8 299 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 NDFIP2Q9NV92 336 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 PLA2G4CQ9UP65 541 aa16.44■□□□□ 0.22
UBE3D-201ENST00000237186 PRR5-ARHGAP8B1AHC4 643 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 MSI1O43347 362 aaKnown RBP16.43■□□□□ 0.22
UBE3D-201ENST00000237186 MT-CYBP00156 380 aaPredicted RBP16.43■□□□□ 0.22
UBE3D-201ENST00000237186 SLC2A3P11169 496 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 COL6A2P12110 1019 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 PRKAR2AP13861 404 aaKnown RBP16.43■□□□□ 0.22
UBE3D-201ENST00000237186 PGM1P36871 562 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 ARCN1P48444 511 aaKnown RBP16.43■□□□□ 0.22
UBE3D-201ENST00000237186 IDH3AP50213 366 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 ALDH18A1P54886 795 aaKnown RBP16.43■□□□□ 0.22
UBE3D-201ENST00000237186 ARHGAP8P85298 464 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 SP3Q02447 781 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 DLG2Q15700 870 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 DNAL1Q4LDG9 190 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 SLC39A12Q504Y0 691 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 RANBP10Q6VN20 620 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms