RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 TM9SF1O15321 606 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 CA12O43570 354 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 DNTTP04053 509 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 RTP1P59025 263 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 RASA2Q15283 850 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 IL27RAQ6UWB1 636 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 COLGALT2Q8IYK4 626 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 FIG4Q92562 907 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 NDNQ99608 321 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 TRIM13O60858 407 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 RPL17P18621 184 aaKnown RBP18.71■□□□□ 0.59
CLIP2-201ENST00000223398 MATKP42679 507 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 GPR15P49685 360 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 CCR4P51679 360 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 MON1AQ86VX9 555 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 CYP1A2P05177 515 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 NOMO3P69849 1222 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 CCDC153Q494R4 210 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 WLSQ5T9L3 541 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 AP1ARQ63HQ0 302 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 STK40Q8N2I9 435 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 TRPC4APQ8TEL6 797 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 HNRNPLLQ8WVV9 542 aaKnown RBP18.71■□□□□ 0.59
CLIP2-201ENST00000223398 SHC3Q92529 594 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 MCRS1Q96EZ8 462 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 TCF7L2Q9NQB0 619 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 PAGE1O75459 146 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 WDR47O94967 919 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 CYP1A1P04798 512 aaPredicted RBP18.71■□□□□ 0.59
CLIP2-201ENST00000223398 FAM153BP0C7A2 387 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 PFKFB4Q16877 469 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 KCTD19Q17RG1 926 aaPredicted RBP18.71■□□□□ 0.59
CLIP2-201ENST00000223398 FAM153CQ494X1 144 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 SLC9A9Q8IVB4 645 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 SPPL2BQ8TCT7 592 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 FGFBP2Q9BYJ0 223 aa18.71■□□□□ 0.59
CLIP2-201ENST00000223398 TSPAN1O60635 241 aa18.71■□□□□ 0.58
CLIP2-201ENST00000223398 USP1O94782 785 aa18.71■□□□□ 0.58
CLIP2-201ENST00000223398 SYN1P17600 705 aa18.71■□□□□ 0.58
CLIP2-201ENST00000223398 TBL3Q12788 808 aaKnown RBP18.71■□□□□ 0.58
CLIP2-201ENST00000223398 CNSTQ6PJW8 725 aa18.71■□□□□ 0.58
CLIP2-201ENST00000223398 PDZD7Q9H5P4 517 aa18.71■□□□□ 0.58
CLIP2-201ENST00000223398 PCDHB9Q9Y5E1 797 aa18.71■□□□□ 0.58
CLIP2-201ENST00000223398 DAB1O75553 588 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 VAC14Q08AM6 782 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 TRAF2Q12933 501 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 ABRQ12979 859 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 CRYMQ14894 314 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 REPS1Q96D71 796 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 CNBD2Q96M20 576 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 KCTD14Q9BQ13 255 aaPredicted RBP18.7■□□□□ 0.58
CLIP2-201ENST00000223398 IL22Q9GZX6 179 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 ERBB2P04626 1255 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 HTR1BP28222 390 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 MARCKSL1P49006 195 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 ATAT1Q5SQI0 421 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 ATAD3BQ5T9A4 648 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 CRTC3Q6UUV7 619 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 SPPL2AQ8TCT8 520 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 APBB2Q92870 758 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 PCDHA2Q9Y5H9 948 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 CES2O00748 559 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 BANF1O75531 89 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 IFNA16P05015 189 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 IFNL1Q8IU54 200 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 OR10G6Q8NH81 332 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 MAGEC3Q8TD91 643 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 MFSD14AQ96MC6 490 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 TCF25Q9BQ70 676 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 ABCG8Q9H221 673 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 CNGB3Q9NQW8 809 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 KLQ9UEF7 1012 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 ZNF839A8K0R7 811 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 GSNP06396 782 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 UBTFL6P0CB48 400 aaPredicted RBP18.7■□□□□ 0.58
CLIP2-201ENST00000223398 ZNF280AP59817 542 aaPredicted RBP18.7■□□□□ 0.58
CLIP2-201ENST00000223398 FAM46CQ5VWP2 391 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 FBXO22Q8NEZ5 403 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 OLFM3Q96PB7 478 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 RSPH9Q9H1X1 276 aaPredicted RBP18.7■□□□□ 0.58
CLIP2-201ENST00000223398 L2HGDHQ9H9P8 463 aa18.7■□□□□ 0.58
CLIP2-201ENST00000223398 TPP1O14773 563 aa18.69■□□□□ 0.58
CLIP2-201ENST00000223398 IFNA14P01570 189 aa18.69■□□□□ 0.58
CLIP2-201ENST00000223398 SERPINE1P05121 402 aa18.69■□□□□ 0.58
CLIP2-201ENST00000223398 FGRP09769 529 aa18.69■□□□□ 0.58
CLIP2-201ENST00000223398 SNHG28P0DPA3 235 aa18.69■□□□□ 0.58
CLIP2-201ENST00000223398 CCDC142Q17RM4 750 aa18.69■□□□□ 0.58
CLIP2-201ENST00000223398 TRIM60Q495X7 471 aa18.69■□□□□ 0.58
CLIP2-201ENST00000223398 TEX9Q8N6V9 391 aa18.69■□□□□ 0.58
CLIP2-201ENST00000223398 OR8D1Q8WZ84 308 aa18.69■□□□□ 0.58
CLIP2-201ENST00000223398 KLHL28Q9NXS3 571 aa18.69■□□□□ 0.58
CLIP2-201ENST00000223398 CLK1P49759 484 aaKnown RBP18.69■□□□□ 0.58
CLIP2-201ENST00000223398 IRF8Q02556 426 aa18.69■□□□□ 0.58
CLIP2-201ENST00000223398 SNAP47Q5SQN1 464 aa18.69■□□□□ 0.58
CLIP2-201ENST00000223398 PSRC1Q6PGN9 363 aaPredicted RBP18.69■□□□□ 0.58
CLIP2-201ENST00000223398 SEPHS2Q99611 448 aa18.69■□□□□ 0.58
CLIP2-201ENST00000223398 GNPTGQ9UJJ9 305 aa18.69■□□□□ 0.58
CLIP2-201ENST00000223398 NDRG2Q9UN36 371 aaKnown RBP18.69■□□□□ 0.58
CLIP2-201ENST00000223398 CSTF3Q12996 717 aaKnown RBP18.69■□□□□ 0.58
CLIP2-201ENST00000223398 SLC51AQ86UW1 340 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms