RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 RETREG1Q9H6L5 497 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.96□□□□□ -0.33
LSM5-201ENST00000223084 WSB2Q9NYS7 404 aaPredicted RBP12.96□□□□□ -0.33
LSM5-201ENST00000223084 CWC15Q9P013 229 aaKnown RBP12.96□□□□□ -0.33
LSM5-201ENST00000223084 FCF1Q9Y324 198 aaKnown RBP12.96□□□□□ -0.33
LSM5-201ENST00000223084 MFHAS1Q9Y4C4 1052 aa12.96□□□□□ -0.33
LSM5-201ENST00000223084 A0A1W2PP55 124 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 EIF3CLB5ME19 914 aaKnown RBP12.95□□□□□ -0.34
LSM5-201ENST00000223084 RASA4BC9J798 803 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 PLK4O00444 970 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 FGF10O15520 208 aaPredicted RBP12.95□□□□□ -0.34
LSM5-201ENST00000223084 RASA4O43374 803 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 RNASEH1O60930 286 aaKnown RBP12.95□□□□□ -0.34
LSM5-201ENST00000223084 IGLV3-19P01714 112 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 ERCC2P18074 760 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 AMPD1P23109 780 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 CDC25BP30305 580 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 SLC8A1P32418 973 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 ACSL1P33121 698 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 ETFBP38117 255 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 MAGEA1P43355 309 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 SERPINH1P50454 418 aaKnown RBP12.95□□□□□ -0.34
LSM5-201ENST00000223084 TAS2R40P59535 323 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 CST6Q15828 149 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 DPYSL2Q16555 572 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 POM121L1PQ3SYA9 428 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 ATP13A4Q4VNC1 1196 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 RETSATQ6NUM9 610 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 C22orf39Q6P5X5 142 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 CYP2U1Q7Z449 544 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 POLNQ7Z5Q5 900 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 PSTKQ8IV42 348 aaKnown RBP12.95□□□□□ -0.34
LSM5-201ENST00000223084 SLC41A1Q8IVJ1 513 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 GANCQ8TET4 914 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 OR8D1Q8WZ84 308 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 PIGKQ92643 395 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 EIF3CQ99613 913 aaKnown RBP12.95□□□□□ -0.34
LSM5-201ENST00000223084 GPR174Q9BXC1 333 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 FBXL12Q9NXK8 326 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 SERGEFQ9UGK8 458 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 SARDHQ9UL12 918 aa12.95□□□□□ -0.34
LSM5-201ENST00000223084 CACNA1GO43497 2377 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 ATXN2Q99700 1313 aaKnown RBP12.94□□□□□ -0.34
LSM5-201ENST00000223084 ZNF292O60281 2723 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 BCLAF3A2AJT9 711 aaKnown RBP12.94□□□□□ -0.34
LSM5-201ENST00000223084 H3BRJ5 948 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 RNF103O00237 685 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 BUB1O43683 1085 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 KDELR3O43731 214 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 ZNF821O75541 412 aaPredicted RBP12.94□□□□□ -0.34
LSM5-201ENST00000223084 LCA5LO95447 670 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 IL1BP01584 269 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 CD48P09326 243 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 C7P10643 843 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 FECHP22830 423 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 ITPKAP23677 461 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 HTR7P34969 479 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 CYLC1P35663 651 aaPredicted RBP12.94□□□□□ -0.34
LSM5-201ENST00000223084 MPLP40238 635 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 DNA2P51530 1060 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 YBEYP58557 167 aaPredicted RBP12.94□□□□□ -0.34
LSM5-201ENST00000223084 ZBTB16Q05516 673 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 ZNF33AQ06730 810 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 SLC20A2Q08357 652 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 MMRN1Q13201 1228 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 DPYSQ14117 519 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 ELAVL3Q14576 367 aaKnown RBP12.94□□□□□ -0.34
LSM5-201ENST00000223084 HADHQ16836 314 aaKnown RBP12.94□□□□□ -0.34
LSM5-201ENST00000223084 TTC31Q49AM3 519 aaPredicted RBP12.94□□□□□ -0.34
LSM5-201ENST00000223084 LYSMD4Q5XG99 296 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 RAD9BQ6WBX8 426 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 TP53INP2Q8IXH6 220 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 CCDC170Q8IYT3 715 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 UMODL1-AS1Q8N2C9 162 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 NPWQ8N729 165 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 CHST14Q8NCH0 376 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 OR2A12Q8NGT7 310 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 TEKT4Q8WW24 435 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 RFFLQ8WZ73 363 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 HSPA12BQ96MM6 686 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 SLC39A8Q9C0K1 460 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 LRRC19Q9H756 370 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 PCDH18Q9HCL0 1135 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 SEMA4GQ9NTN9 838 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 TMEM74BQ9NUR3 256 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 ETNK2Q9NVF9 386 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 KLHL11Q9NVR0 708 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 INTUQ9ULD6 942 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 HPCAL4Q9UM19 191 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 PCDHA13Q9Y5I0 950 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.94□□□□□ -0.34
LSM5-201ENST00000223084 TNRC6BQ9UPQ9 1833 aaKnown RBP12.94□□□□□ -0.34
LSM5-201ENST00000223084 CFAP54Q96N23 3096 aa12.94□□□□□ -0.34
LSM5-201ENST00000223084 MCF2LO15068 1137 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 RNASEH2AO75792 299 aaKnown RBP12.93□□□□□ -0.34
LSM5-201ENST00000223084 CTSLP07711 333 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 MAOBP27338 520 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 OXTRP30559 389 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 ARL4AP40617 200 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 HCAR3P49019 387 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms