RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 ANGPTL2Q9UKU9 493 aa14.89□□□□□ -0.03
CNOT3-201ENST00000221232 EME2A4GXA9 379 aaPredicted RBP14.89□□□□□ -0.03
CNOT3-201ENST00000221232 CFLARO15519 480 aa14.89□□□□□ -0.03
CNOT3-201ENST00000221232 FAM110CQ1W6H9 321 aa14.89□□□□□ -0.03
CNOT3-201ENST00000221232 ESRP1Q6NXG1 681 aaKnown RBP14.89□□□□□ -0.03
CNOT3-201ENST00000221232 ANKRD23Q86SG2 305 aa14.89□□□□□ -0.03
CNOT3-201ENST00000221232 PHC3Q8NDX5 983 aa14.89□□□□□ -0.03
CNOT3-201ENST00000221232 LENG8Q96PV6 779 aaPredicted RBP14.89□□□□□ -0.03
CNOT3-201ENST00000221232 ZNF184Q99676 751 aaPredicted RBP14.89□□□□□ -0.03
CNOT3-201ENST00000221232 LRCH1Q9Y2L9 728 aa14.89□□□□□ -0.03
CNOT3-201ENST00000221232 TRIM13O60858 407 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 PGK1P00558 417 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 AHSGP02765 367 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 LRPAP1P30533 357 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 CHRNA4P43681 627 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 SEMA3BQ13214 749 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 SEPT6Q14141 434 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 GNASQ5JWF2 1037 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 STXBP5Q5T5C0 1151 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 KCTD11Q693B1 232 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 IL31Q6EBC2 164 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 ZNF419Q96HQ0 510 aaPredicted RBP14.88□□□□□ -0.03
CNOT3-201ENST00000221232 TEKT5Q96M29 485 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 CDH19Q9H159 772 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 CNGB3Q9NQW8 809 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 MPP6Q9NZW5 540 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 TTC24A2A3L6 582 aaPredicted RBP14.88□□□□□ -0.03
CNOT3-201ENST00000221232 CELF2O95319 508 aaKnown RBP14.88□□□□□ -0.03
CNOT3-201ENST00000221232 GABRB3P28472 473 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 GRIA4P48058 902 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 HARS2P49590 506 aaKnown RBP14.88□□□□□ -0.03
CNOT3-201ENST00000221232 ASPHQ12797 758 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 MAP2K5Q13163 448 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 FSCN1Q16658 493 aaKnown RBP14.88□□□□□ -0.03
CNOT3-201ENST00000221232 INSCQ1MX18 579 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 CCDC153Q494R4 210 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 SDHAF4Q5VUM1 108 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 RNF111Q6ZNA4 994 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 RPS27LQ71UM5 84 aaKnown RBP14.88□□□□□ -0.03
CNOT3-201ENST00000221232 LRRTM3Q86VH5 581 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 ANKRD27Q96NW4 1050 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 ACE2Q9BYF1 805 aaPredicted RBP14.88□□□□□ -0.03
CNOT3-201ENST00000221232 PIDD1Q9HB75 910 aa14.88□□□□□ -0.03
CNOT3-201ENST00000221232 JUNP05412 331 aaKnown RBP14.87□□□□□ -0.03
CNOT3-201ENST00000221232 OR4Q2P0C623 313 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 ARSAP15289 507 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 ITGAXP20702 1163 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 LHX1P48742 406 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 CPT1AP50416 773 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 TBL3Q12788 808 aaKnown RBP14.87□□□□□ -0.03
CNOT3-201ENST00000221232 ZRSR2Q15696 482 aaKnown RBP14.87□□□□□ -0.03
CNOT3-201ENST00000221232 PDCD2Q16342 344 aaPredicted RBP14.87□□□□□ -0.03
CNOT3-201ENST00000221232 ARL13AQ5H913 290 aaPredicted RBP14.87□□□□□ -0.03
CNOT3-201ENST00000221232 FICDQ9BVA6 458 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 AGO3Q9H9G7 860 aaKnown RBP14.87□□□□□ -0.03
CNOT3-201ENST00000221232 PCDHB12Q9Y5F1 795 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 TMEM233B4DJY2 109 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 HHLA1C9JL84 531 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 F8W8V4 182 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 M0QZ92 97 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 FBXO21O94952 628 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 PIGNO95427 931 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 COX4I1P13073 169 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 SP100P23497 879 aaPredicted RBP14.87□□□□□ -0.03
CNOT3-201ENST00000221232 MRPS35P82673 323 aaKnown RBP14.87□□□□□ -0.03
CNOT3-201ENST00000221232 KLF10Q13118 480 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 AGMOQ6ZNB7 445 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 BHLHA9Q7RTU4 235 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 ZSCAN18Q8TBC5 510 aaPredicted RBP14.87□□□□□ -0.03
CNOT3-201ENST00000221232 DQX1Q8TE96 717 aaKnown RBP14.87□□□□□ -0.03
CNOT3-201ENST00000221232 DNAJC28Q9NX36 388 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 ZDHHC2Q9UIJ5 367 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 CDH22Q9UJ99 828 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 PLXNB2O15031 1838 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 ITGB1P05556 798 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 GALNT2Q10471 571 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 CCNIQ14094 377 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 PRPSAP1Q14558 356 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 TBCCQ15814 346 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 CNGA3Q16281 694 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 SPRYD7Q5W111 196 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 NAIF1Q69YI7 327 aaPredicted RBP14.87□□□□□ -0.03
CNOT3-201ENST00000221232 ITPRIPL1Q6GPH6 555 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 NXNL1Q96CM4 212 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 HDAC11Q96DB2 347 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 CMTM5Q96DZ9 223 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 CATSPER2Q96P56 530 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 RTP3Q9BQQ7 232 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 S100A14Q9HCY8 104 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 SSX2IPQ9Y2D8 614 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 CDY1Q9Y6F8 540 aa14.87□□□□□ -0.03
CNOT3-201ENST00000221232 SBF1O95248 1867 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 NEMP2A6NFY4 417 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 HAS3O00219 553 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 CCL22O00626 93 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 AURKAO14965 403 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 KIF1CO43896 1103 aaKnown RBP14.86□□□□□ -0.03
CNOT3-201ENST00000221232 SMIM24O75264 130 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 NUDT2P50583 147 aa14.86□□□□□ -0.03
CNOT3-201ENST00000221232 CDH17Q12864 832 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms